RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 TGDSO95455 350 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ATP6V1B1P15313 513 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 NPTX2P47972 431 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ACOT2P49753 483 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 GALK1P51570 392 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 AP2B1P63010 937 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TMPRSS15P98073 1019 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 SLC18A2Q05940 514 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 CYP24A1Q07973 514 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TUBB3Q13509 450 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PDK3Q15120 406 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 WDR44Q5JSH3 913 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 SLC27A3Q5K4L6 730 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 DACT2Q5SW24 774 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 FAXCQ5TGI0 409 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TDRD10Q5VZ19 366 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 DPY19L2Q6NUT2 758 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 KLHDC10Q6PID8 442 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 RSPH3Q86UC2 560 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 C12orf56Q8IXR9 622 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PALM2Q8IXS6 379 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 NIM1KQ8IY84 436 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 UNC5BQ8IZJ1 945 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ATP11CQ8NB49 1132 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ZFP28Q8NHY6 868 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 GRIN3AQ8TCU5 1115 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 MOCOSQ96EN8 888 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 APOPT1Q96IL0 206 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 FAM210AQ96ND0 272 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PLEKHG4BQ96PX9 1271 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 HAPLN2Q9GZV7 340 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 SSU72Q9NP77 194 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TAGLN3Q9UI15 199 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 XPO7Q9UIA9 1087 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TBX20Q9UMR3 447 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 SHOC2Q9UQ13 582 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ZNF510Q9Y2H8 683 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TDRKHQ9Y2W6 561 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PCDHB2Q9Y5E7 798 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 C15orf38-AP3S2A0A0A6YYH1 394 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TMEM191CA6NGB0 347 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 GSRP00390 522 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PROCP04070 461 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TMEM191BP0C7N4 346 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 CDK4P11802 303 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 UQCRBP14927 111 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 YWHABP31946 246 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 GTF2H1P32780 548 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 QARSP47897 775 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 LIG4P49917 911 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ATXN3P54252 364 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 EMP3P54852 163 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 OSTNP61366 133 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 BASP1P80723 227 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ZNF200P98182 395 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PLOD1Q02809 727 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 MED21Q13503 144 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 MYBPC2Q14324 1141 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ACAP1Q15027 740 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TRIP10Q15642 601 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 MYLK3Q32MK0 819 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TRMT5Q32P41 509 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 NADK2Q4G0N4 442 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 C16orf46Q6P387 395 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TAS1R3Q7RTX0 852 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TMC7Q7Z402 723 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ARPINQ7Z6K5 226 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 USP37Q86T82 979 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 CHSY1Q86X52 802 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TTLL6Q8N841 843 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 SMC1BQ8NDV3 1235 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 FEZF2Q8TBJ5 459 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ZBTB45Q96K62 511 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PRICKLE1Q96MT3 831 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 RILPQ96NA2 401 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 CENPKQ9BS16 269 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 APOL6Q9BWW8 343 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 GRIP2Q9C0E4 1043 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 KLHL4Q9C0H6 718 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 PCDH9Q9HC56 1237 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ACSS2Q9NR19 701 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 C1orf112Q9NSG2 853 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ASTN2O75129 1339 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 NFASCO94856 1347 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 E2F8A0AVK6 867 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 E7ESA3 106 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 SPECC1L-ADORA2AF8WAN1 911 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 ADCY6O43306 1168 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 CST8O60676 142 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 RFPL1O75677 317 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 VIL1P09327 827 aaKnown RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 RAG1P15918 1043 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TPP2P29144 1249 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-214ENST00000552783 GNA15P30679 374 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 HPCAP84074 193 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 FOLH1Q04609 750 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 MMRN1Q13201 1228 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 MMEL1Q495T6 779 aa5.05□□□□□ -1.6
LIMA1-214ENST00000552783 TFDP3Q5H9I0 405 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms