RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 MRPL4Q9BYD3 311 aaKnown RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 TM9SF3Q9HD45 589 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 SH3GLB2Q9NR46 395 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 TMLHEQ9NVH6 421 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 SMPD4Q9NXE4 827 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 PLEKHB1Q9UF11 243 aaPredicted RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 UBQLN1Q9UMX0 589 aaKnown RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 STARD13Q9Y3M8 1113 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 PCDHB6Q9Y5E3 794 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 TMEM131Q92545 1883 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 A0A1B0GTQ1 180 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 WASH3PC4AMC7 463 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 MT-CO3P00414 261 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 CXCL8P10145 99 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 GCFC2P16383 781 aaKnown RBP12.12□□□□□ -0.47
GPN3-208ENST00000550974 ABCB4P21439 1286 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 OXTRP30559 389 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 GRIA4P48058 902 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 PDE6CP51160 858 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 TPMTP51580 245 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 FOSBP53539 338 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 RCAN1P53805 252 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
GPN3-208ENST00000550974 MPZL3Q6UWV2 235 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 ADAT2Q7Z6V5 191 aaKnown RBP12.12□□□□□ -0.47
GPN3-208ENST00000550974 NEK8Q86SG6 692 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 METTL3Q86U44 580 aaKnown RBP12.12□□□□□ -0.47
GPN3-208ENST00000550974 ETFBKMTQ8IXQ9 262 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 DCP1BQ8IZD4 617 aaKnown RBP12.12□□□□□ -0.47
GPN3-208ENST00000550974 RFFLQ8WZ73 363 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 EXTL1Q92935 676 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 ZBTB45Q96K62 511 aaPredicted RBP12.12□□□□□ -0.47
GPN3-208ENST00000550974 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 CPQQ9Y646 472 aa12.12□□□□□ -0.47
GPN3-208ENST00000550974 DFNA5O60443 496 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 CYP11A1P05108 521 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 CYP11B2P19099 503 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 CYP3A5P20815 502 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 GRIK1P39086 918 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 CTSKP43235 329 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
GPN3-208ENST00000550974 NUCB1Q02818 461 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 ILKQ13418 452 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 ZBTB6Q15916 424 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 ZSCAN23Q3MJ62 389 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 FUT11Q495W5 492 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 XKR5Q6UX68 686 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 FAM124AQ86V42 546 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 SMC5Q8IY18 1101 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 MMS19Q96T76 1030 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 NUP58Q9BVL2 599 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 THSD1Q9NS62 852 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 CFAP97Q9P2B7 532 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 ADAMTS1Q9UHI8 967 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 PCDHA12Q9UN75 941 aa12.11□□□□□ -0.47
GPN3-208ENST00000550974 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 ABLIM1O14639 778 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 TRAK2O60296 914 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
GPN3-208ENST00000550974 NEFLP07196 543 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 PROZP22891 400 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 CYP2F1P24903 491 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 AFMP43652 599 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 ANO4Q32M45 955 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 CACUL1Q86Y37 369 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 SCFD1Q8WVM8 642 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
GPN3-208ENST00000550974 RNF38Q9H0F5 515 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 C6orf106Q9H6K1 298 aaPredicted RBP12.1□□□□□ -0.47
GPN3-208ENST00000550974 DSEQ9UL01 958 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 PHLPP2Q6ZVD8 1323 aa12.1□□□□□ -0.47
GPN3-208ENST00000550974 FBN2P35556 2912 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 CYB561D2O14569 222 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 XPOTO43592 962 aaKnown RBP12.09□□□□□ -0.47
GPN3-208ENST00000550974 USP12O75317 370 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 SFTPCP11686 197 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 CKMT2P17540 419 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 ELAVL4P26378 380 aaKnown RBP12.09□□□□□ -0.47
GPN3-208ENST00000550974 LSSP48449 732 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 C21orf59P57076 290 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 FOXK1P85037 733 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 STARD3Q14849 445 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 NTRK3Q16288 839 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 ARL13BQ3SXY8 428 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 SGO2Q562F6 1265 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 WSCD1Q658N2 575 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 GRAMD4Q6IC98 578 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 TMPRSS6Q8IU80 811 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 KIAA1958Q8N8K9 716 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 PRCCQ92733 491 aaPredicted RBP12.09□□□□□ -0.47
GPN3-208ENST00000550974 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 ELF4Q99607 663 aaPredicted RBP12.09□□□□□ -0.47
GPN3-208ENST00000550974 PYM1Q9BRP8 204 aaKnown RBP12.09□□□□□ -0.47
GPN3-208ENST00000550974 POLR1BQ9H9Y6 1135 aa12.09□□□□□ -0.47
GPN3-208ENST00000550974 PLEKHA5Q9HAU0 1116 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms