RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 EML3Q32P44 896 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 RAB41Q5JT25 222 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 DGKKQ5KSL6 1271 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 PPP1R26Q5T8A7 1209 aaPredicted RBP16.21■□□□□ 0.19
SSH1-204ENST00000546697 KLHL10Q6JEL2 608 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 RBM43Q6ZSC3 357 aaKnown RBP16.21■□□□□ 0.19
SSH1-204ENST00000546697 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSH1-204ENST00000546697 SH3RF2Q8TEC5 729 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 FBXO32Q969P5 355 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 MED10Q9BTT4 135 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 SEMA4AQ9H3S1 761 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 MMRN2Q9H8L6 949 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 FAM49BQ9NUQ9 324 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 KIAA1257Q9ULG3 409 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 CTNND2Q9UQB3 1225 aa16.21■□□□□ 0.19
SSH1-204ENST00000546697 ZFHX2Q9C0A1 2572 aaPredicted RBP16.21■□□□□ 0.18
SSH1-204ENST00000546697 ZNF292O60281 2723 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 CD58P19256 250 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 YWHAEP62258 255 aaKnown RBP16.2■□□□□ 0.18
SSH1-204ENST00000546697 ORC1Q13415 861 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 CCDC40Q4G0X9 1142 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 TMEM196Q5HYL7 178 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 IRF2BP1Q8IU81 584 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 ANKRD52Q8NB46 1076 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 ATP2A3Q93084 1043 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 PHOX2BQ99453 314 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 SRRTQ9BXP5 876 aaKnown RBP16.2■□□□□ 0.18
SSH1-204ENST00000546697 FAM126AQ9BYI3 521 aaPredicted RBP16.2■□□□□ 0.18
SSH1-204ENST00000546697 ECT2Q9H8V3 914 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 TRPC7Q9HCX4 862 aa16.2■□□□□ 0.18
SSH1-204ENST00000546697 E2F8A0AVK6 867 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 GTPBP10A4D1E9 387 aaKnown RBP16.19■□□□□ 0.18
SSH1-204ENST00000546697 LEFTY2O00292 366 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 COCHO43405 550 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 PAEPP09466 180 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 SP9P0CG40 484 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 ERCC5P28715 1186 aaPredicted RBP16.19■□□□□ 0.18
SSH1-204ENST00000546697 HOXA6P31267 233 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 PSEN1P49768 467 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 MRE11P49959 708 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 MAP3K7CLP57077 242 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 AMPD2Q01433 879 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 CETN1Q12798 172 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 KCNH2Q12809 1159 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 LRRC32Q14392 662 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 GAS6Q14393 721 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 CAMK4Q16566 473 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 PKDCCQ504Y2 493 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 HECTD3Q5T447 861 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 GPRIN1Q7Z2K8 1008 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 SCML4Q8N228 414 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 ZBTB44Q8NCP5 570 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 ATOH1Q92858 354 aaPredicted RBP16.19■□□□□ 0.18
SSH1-204ENST00000546697 OTUB2Q96DC9 234 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 CLIC5Q9NZA1 410 aa16.19■□□□□ 0.18
SSH1-204ENST00000546697 GREM1O60565 184 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 AFPP02771 609 aaKnown RBP16.18■□□□□ 0.18
SSH1-204ENST00000546697 CCDC192P0DO97 292 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 GJA4P35212 333 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 SOX9P48436 509 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 KPNA1P52294 538 aaPredicted RBP16.18■□□□□ 0.18
SSH1-204ENST00000546697 ZNF132P52740 706 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 MTAPQ13126 283 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 MEA1Q16626 185 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 GAB4Q2WGN9 574 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 PM20D1Q6GTS8 502 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 CC2D1AQ6P1N0 951 aaPredicted RBP16.18■□□□□ 0.18
SSH1-204ENST00000546697 ADGRG2Q8IZP9 1017 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 SPEM1Q8N4L4 309 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 NT5C1BQ96P26 610 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 EBF3Q9H4W6 596 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 LMAN1LQ9HAT1 526 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 TLR8Q9NR97 1041 aaKnown RBP16.18■□□□□ 0.18
SSH1-204ENST00000546697 DUS2Q9NX74 493 aaKnown RBP16.18■□□□□ 0.18
SSH1-204ENST00000546697 GMIPQ9P107 970 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSH1-204ENST00000546697 CPQQ9Y646 472 aa16.18■□□□□ 0.18
SSH1-204ENST00000546697 O00370 1275 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 SLC9A3R1O14745 358 aaPredicted RBP16.17■□□□□ 0.18
SSH1-204ENST00000546697 LILRB5O75023 590 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 VDRP11473 427 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 ARSAP15289 507 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 ADORA2BP29275 332 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 EIF2DP41214 584 aaKnown RBP16.17■□□□□ 0.18
SSH1-204ENST00000546697 PGFP49763 221 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 STX17P56962 302 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 TRIM68Q6AZZ1 485 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 TTC30AQ86WT1 665 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 CPA6Q8N4T0 437 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 HEXIM2Q96MH2 286 aaKnown RBP16.17■□□□□ 0.18
SSH1-204ENST00000546697 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.18
SSH1-204ENST00000546697 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.17■□□□□ 0.18
SSH1-204ENST00000546697 TBC1D14Q9P2M4 693 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
SSH1-204ENST00000546697 PCDHGA2Q9Y5H1 932 aa16.17■□□□□ 0.18
SSH1-204ENST00000546697 CFAP54Q96N23 3096 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms