RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SIM2Q14190 667 aaPredicted RBP22.39■■□□□ 1.17
SCARB1-210ENST00000545493 LAIR1Q6GTX8 287 aa22.39■■□□□ 1.17
SCARB1-210ENST00000545493 CRYBG2Q8N1P7 616 aa22.39■■□□□ 1.17
SCARB1-210ENST00000545493 SECISBP2LQ93073 1101 aaKnown RBP22.39■■□□□ 1.17
SCARB1-210ENST00000545493 CSNK1G1Q9HCP0 422 aa22.39■■□□□ 1.17
SCARB1-210ENST00000545493 CFAP97Q9P2B7 532 aa22.39■■□□□ 1.17
SCARB1-210ENST00000545493 COCHO43405 550 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 KRT13P13646 458 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 PXNP49023 591 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-210ENST00000545493 MCCD1P59942 119 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-210ENST00000545493 ADAM9Q13443 819 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 EDRF1Q3B7T1 1238 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 FBXO43Q4G163 708 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 SNX30Q5VWJ9 437 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 GPRIN1Q7Z2K8 1008 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 KIAA1958Q8N8K9 716 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 RPLP0P6Q8NHW5 317 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 EEF2KMTQ96G04 330 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 IMPG2Q9BZV3 1241 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 NIF3L1Q9GZT8 377 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 CCSER2Q9H7U1 834 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 TMEM8AQ9HCN3 771 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 RAB23Q9ULC3 237 aa22.38■■□□□ 1.17
SCARB1-210ENST00000545493 ATG13O75143 517 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 RPL13P26373 211 aaKnown RBP22.37■■□□□ 1.17
SCARB1-210ENST00000545493 ADORA2BP29275 332 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 CNR2P34972 360 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 PGFP49763 221 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 MAP3K7CLP57077 242 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 CLEC20AQ6ZU45 233 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 WHAMMQ8TF30 809 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 EXOC4Q96A65 974 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 HHIPQ96QV1 700 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 DLL3Q9NYJ7 618 aa22.37■■□□□ 1.17
SCARB1-210ENST00000545493 ANTXRLA6NF34 631 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 CILPO75339 1184 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 TUBP50607 506 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 NR1H3Q13133 447 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 BECN1Q14457 450 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 HECTD3Q5T447 861 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 ERMP1Q7Z2K6 904 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.36■■□□□ 1.17
SCARB1-210ENST00000545493 C12orf40Q86WS4 652 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 ENGASEQ8NFI3 743 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 SEMA4DQ92854 862 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 CYP3A43Q9HB55 503 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 COMMD8Q9NX08 183 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 CHORDC1Q9UHD1 332 aaPredicted RBP22.36■■□□□ 1.17
SCARB1-210ENST00000545493 USP18Q9UMW8 372 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 SLC8A2Q9UPR5 921 aa22.36■■□□□ 1.17
SCARB1-210ENST00000545493 HHLA1C9JL84 531 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 RETP07949 1114 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 FAM200BP0CF97 657 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 CD58P19256 250 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 MXI1P50539 228 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 SPEM2Q0P670 501 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 DHCR24Q15392 516 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 RSPO4Q2I0M5 234 aaPredicted RBP22.35■■□□□ 1.17
SCARB1-210ENST00000545493 COBLL1Q53SF7 1204 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 KRT39Q6A163 491 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 DDX42Q86XP3 938 aaKnown RBP eCLIP22.35■■□□□ 1.17
SCARB1-210ENST00000545493 ZC3H3Q8IXZ2 948 aaKnown RBP22.35■■□□□ 1.17
SCARB1-210ENST00000545493 GPR161Q8N6U8 529 aaKnown RBP22.35■■□□□ 1.17
SCARB1-210ENST00000545493 ERCC4Q92889 916 aaPredicted RBP22.35■■□□□ 1.17
SCARB1-210ENST00000545493 CCDC34Q96HJ3 373 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 HNRNPABQ99729 332 aaKnown RBP22.35■■□□□ 1.17
SCARB1-210ENST00000545493 RMND1Q9NWS8 449 aa22.35■■□□□ 1.17
SCARB1-210ENST00000545493 CCDC163A0A0D9SF12 145 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 CHRM1P11229 460 aaPredicted RBP22.34■■□□□ 1.17
SCARB1-210ENST00000545493 GTF2H1P32780 548 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 PRCPP42785 496 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 MESP2Q0VG99 397 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 ZNF658Q5TYW1 1059 aaPredicted RBP22.34■■□□□ 1.17
SCARB1-210ENST00000545493 SYT13Q7L8C5 426 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 FAM160A2Q8N612 972 aaPredicted RBP22.34■■□□□ 1.17
SCARB1-210ENST00000545493 GAB3Q8WWW8 586 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 WBP2Q969T9 261 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 JAKMIP2Q96AA8 810 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 ACDQ96AP0 544 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 NT5C1AQ9BXI3 368 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 MYOFQ9NZM1 2061 aa22.34■■□□□ 1.17
SCARB1-210ENST00000545493 K7EQS6 105 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 SLC9A3R1O14745 358 aaPredicted RBP22.33■■□□□ 1.17
SCARB1-210ENST00000545493 CYP26A1O43174 497 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 EPB41P11171 864 aaKnown RBP22.33■■□□□ 1.17
SCARB1-210ENST00000545493 PMS1P54277 932 aaKnown RBP22.33■■□□□ 1.17
SCARB1-210ENST00000545493 NUCB2P80303 420 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 FOXK2Q01167 660 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 LMNB2Q03252 620 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 DMC1Q14565 340 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 PUM1Q14671 1186 aaKnown RBP eCLIP22.33■■□□□ 1.173e-10■□□□□ 8.1
SCARB1-210ENST00000545493 RHBDF2Q6PJF5 856 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 CEP68Q76N32 757 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 SFTPA1Q8IWL2 248 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 ADGRG2Q8IZP9 1017 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 SPATA20Q8TB22 786 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 CYFIP2Q96F07 1278 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 ARID3AQ99856 593 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 OSER1Q9NX31 292 aa22.33■■□□□ 1.17
SCARB1-210ENST00000545493 SPAG17Q6Q759 2223 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms