RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ELMOD1Q8N336 334 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 LEMD2Q8NC56 503 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 APPL2Q8NEU8 664 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 BEST2Q8NFU1 509 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 PLEKHO2Q8TD55 490 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 FAM3CQ92520 227 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 BAP1Q92560 729 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 C18orf25Q96B23 403 aaPredicted RBP7□□□□□ -1.29
CDCA3-209ENST00000544610 CCDC127Q96BQ5 260 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 ZSWIM3Q96MP5 696 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 CNTNAP3BQ96NU0 1288 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 NT5C1BQ96P26 610 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 RTKNQ9BST9 563 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 CNTNAP3Q9BZ76 1288 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 DNAI2Q9GZS0 605 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 IKZF4Q9H2S9 585 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 MMRN2Q9H8L6 949 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 CYP3A43Q9HB55 503 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 PDE11AQ9HCR9 933 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 PARD6AQ9NPB6 346 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 ABHD10Q9NUJ1 306 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 GMEB2Q9UKD1 530 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 NOVA2Q9UNW9 492 aaKnown RBP7□□□□□ -1.29
CDCA3-209ENST00000544610 CNTN6Q9UQ52 1028 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 PIAS3Q9Y6X2 628 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 ANK1P16157 1881 aa7□□□□□ -1.29
CDCA3-209ENST00000544610 ANO9A1A5B4 782 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 GOLGA8IPA6NC78 632 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 GOLGA6L9A6NEM1 432 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 GOLGA8JA6NMD2 632 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 LACTBL1A8MY62 500 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 LRP3O75074 770 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 PAPSS2O95340 614 aaPredicted RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 SERPING1P05155 500 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 CXCL8P10145 99 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 DLATP10515 647 aaKnown RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 CHRNB1P11230 501 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 CPB1P15086 417 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 FERP16591 822 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 CASP14P31944 242 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 VIPR2P41587 438 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 STAT1P42224 750 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 GCLMP48507 274 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 DLG4P78352 724 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 RBP5P82980 135 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 FCHO2Q0JRZ9 810 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 MYO1EQ12965 1108 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 NCOA4Q13772 614 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 GAS6Q14393 721 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 TEAD2Q15562 447 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 C10orf76Q5T2E6 689 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 TDRD10Q5VZ19 366 aaKnown RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 C1orf228Q6PIY5 440 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 RNF19BQ6ZMZ0 732 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 CACNA2D4Q7Z3S7 1137 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 VPS36Q86VN1 386 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ZNF677Q86XU0 584 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 TMC8Q8IU68 726 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 MFSD6LQ8IWD5 586 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 CELF5Q8N6W0 485 aaKnown RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 CXorf38Q8TB03 319 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 SHKBP1Q8TBC3 707 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ZSCAN18Q8TBC5 510 aaPredicted RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 STK32AQ8WU08 396 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 SHC3Q92529 594 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ZNF516Q92618 1163 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 E2F7Q96AV8 911 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 MSANTD3Q96H12 275 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ZNF512Q96ME7 567 aaPredicted RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ZNF560Q96MR9 790 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 SPAG5Q96R06 1193 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 BAG1Q99933 345 aaPredicted RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 OXCT2Q9BYC2 517 aaPredicted RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 GPR88Q9GZN0 384 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 INTS2Q9H0H0 1204 aaKnown RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 LMAN1LQ9HAT1 526 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 SIX2Q9NPC8 291 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 LUC7LQ9NQ29 371 aaKnown RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ASAH2Q9NR71 780 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 FAM207AQ9NSI2 230 aaPredicted RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 TUBGCP4Q9UGJ1 667 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ZMIZ1Q9ULJ6 1067 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 USP18Q9UMW8 372 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 ZKSCAN5Q9Y2L8 839 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 R3HCC1Q9Y3T6 440 aaKnown RBP6.99□□□□□ -1.29
CDCA3-209ENST00000544610 YIPF1Q9Y548 306 aa6.99□□□□□ -1.29
CDCA3-209ENST00000544610 PDCD11Q14690 1871 aaKnown RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 DOCK6Q96HP0 2047 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 EP300Q09472 2414 aaPredicted RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 HEPACAM2A8MVW5 462 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 F8VZ95 297 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 M0QZQ0 153 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 ZNF263O14978 683 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 PHACTR2O75167 634 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 OAZ2O95190 189 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 LCA5LO95447 670 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 VNN2O95498 520 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 HLA-DRAP01903 254 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 RETP07949 1114 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms