RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 DSC1Q08554 894 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 SNX1Q13596 522 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 PDK2Q15119 407 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 TAF5Q15542 800 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 CFAP58Q5T655 872 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 CLEC20AQ6ZU45 233 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 MAP7D3Q8IWC1 876 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 KCTD6Q8NC69 237 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 CCHCR1Q8TD31 782 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 SH3GL2Q99962 352 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 PCSK1NQ9UHG2 260 aa13.35□□□□□ -0.27
PAAF1-214ENST00000544552 ZNF487B1APH4 448 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 MDM4O15151 490 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 GRAP2O75791 330 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 FBXO21O94952 628 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 LCP1P13796 627 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 GGCXP38435 758 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 PLTPP55058 493 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 MRPS5P82675 430 aaKnown RBP13.34□□□□□ -0.27
PAAF1-214ENST00000544552 CAV1Q03135 178 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
PAAF1-214ENST00000544552 C15orf59Q2T9L4 293 aaPredicted RBP13.34□□□□□ -0.27
PAAF1-214ENST00000544552 SMTNL2Q2TAL5 461 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 NOMO2Q5JPE7 1267 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 KCNT1Q5JUK3 1230 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 SH3PXD2AQ5TCZ1 1133 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 KAZNQ674X7 775 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 LRIG3Q6UXM1 1119 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 TMC3Q7Z5M5 1100 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 CCDC89Q8N998 374 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 BBOF1Q8ND07 529 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 FBXO25Q8TCJ0 367 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 CFAP57Q96MR6 1250 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 PEBP4Q96S96 227 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 RTP3Q9BQQ7 232 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 TSPYL1Q9H0U9 437 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 LRRC4Q9HBW1 653 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 TMEM161AQ9NX61 479 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 MTRF1LQ9UGC7 380 aaKnown RBP13.34□□□□□ -0.27
PAAF1-214ENST00000544552 INPP5FQ9Y2H2 1132 aa13.34□□□□□ -0.27
PAAF1-214ENST00000544552 MYBPHLA2RUH7 354 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 CLDN5O00501 218 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 BEST1O76090 585 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 ITGAVP06756 1048 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 MATKP42679 507 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 VCPP55072 806 aaKnown RBP13.33□□□□□ -0.28
PAAF1-214ENST00000544552 HDAC4P56524 1084 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 FAM193AP78312 1265 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 ADCY1Q08828 1119 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 CALCOCO2Q13137 446 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 GPNMBQ14956 572 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 OASLQ15646 514 aaKnown RBP13.33□□□□□ -0.28
PAAF1-214ENST00000544552 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
PAAF1-214ENST00000544552 PLEKHG4Q58EX7 1191 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 RAB41Q5JT25 222 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 STRADAQ7RTN6 431 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 FAM35AQ86V20 835 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 SLC35B2Q8TB61 432 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 FAM172AQ8WUF8 416 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 APBB2Q92870 758 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 ACSF2Q96CM8 615 aaPredicted RBP13.33□□□□□ -0.28
PAAF1-214ENST00000544552 PCED1BQ96HM7 432 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 MED10Q9BTT4 135 aa13.33□□□□□ -0.28
PAAF1-214ENST00000544552 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.33□□□□□ -0.28
PAAF1-214ENST00000544552 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
PAAF1-214ENST00000544552 ENPP3O14638 875 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 CST8O60676 142 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 NBNO60934 754 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 PARNO95453 639 aaKnown RBP13.32□□□□□ -0.28
PAAF1-214ENST00000544552 HSD17B3P37058 310 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 BRCC3P46736 316 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 YWHAZP63104 245 aaKnown RBP13.32□□□□□ -0.28
PAAF1-214ENST00000544552 ATP11AP98196 1134 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 GABPB1Q06547 395 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-214ENST00000544552 DHX9Q08211 1270 aaKnown RBP13.32□□□□□ -0.28
PAAF1-214ENST00000544552 TFDP2Q14188 446 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
PAAF1-214ENST00000544552 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 COLGALT2Q8IYK4 626 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 SCML4Q8N228 414 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 SEPT8Q92599 483 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 NT5C3BQ969T7 300 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 SMARCD1Q96GM5 515 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 SNF8Q96H20 258 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 CCDC114Q96M63 670 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 ZIM3Q96PE6 472 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 PKMYT1Q99640 499 aa13.32□□□□□ -0.28
PAAF1-214ENST00000544552 NGRNQ9NPE2 291 aaKnown RBP13.32□□□□□ -0.28
PAAF1-214ENST00000544552 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms