RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 LACTB2Q53H82 288 aaPredicted RBP14.54□□□□□ -0.08
MSH2-206ENST00000543555 GLRA4Q5JXX5 417 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 NPNTQ6UXI9 565 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 ANKMY2Q8IV38 441 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 SLC35F5Q8WV83 523 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 KDM4CQ9H3R0 1056 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 PPCSQ9HAB8 311 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 CNTN3Q9P232 1028 aa14.54□□□□□ -0.08
MSH2-206ENST00000543555 STX2P32856 288 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 GPX6P59796 221 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 ATP11AP98196 1134 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 ADCY1Q08828 1119 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 PCBP1Q15365 356 aaKnown RBP eCLIP14.53□□□□□ -0.08
MSH2-206ENST00000543555 FAM47CQ5HY64 1035 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 FNBP1LQ5T0N5 605 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 ALKAL1Q6UXT8 129 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 TMEM110Q86TL2 294 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 GDAP1Q8TB36 358 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 LENG1Q96BZ8 264 aaPredicted RBP14.53□□□□□ -0.08
MSH2-206ENST00000543555 NXF3Q9H4D5 531 aaKnown RBP14.53□□□□□ -0.08
MSH2-206ENST00000543555 UBN1Q9NPG3 1134 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 CLUHO75153 1309 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 MBLAC1A4D2B0 266 aaPredicted RBP14.53□□□□□ -0.08
MSH2-206ENST00000543555 CCT8L1PA6NM43 557 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 H0YHG0 523 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 SMAPO00193 183 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 DNM1LO00429 736 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 SNX3O60493 162 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 RECQL4O94761 1208 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 TMEM63AO94886 807 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 CYP2C9P11712 490 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 SLC6A3Q01959 620 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 ROR1Q01973 937 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 SF3A3Q12874 501 aaKnown RBP eCLIP14.53□□□□□ -0.08
MSH2-206ENST00000543555 MSS51Q4VC12 460 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 C9orf57Q5W0N0 161 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 PPP1R21Q6ZMI0 780 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 UNC93AQ86WB7 457 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 TAB3Q8N5C8 712 aaPredicted RBP14.53□□□□□ -0.08
MSH2-206ENST00000543555 RNF157Q96PX1 679 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 ZFYVE28Q9HCC9 887 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 FGFR1OP2Q9NVK5 253 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 HESX1Q9UBX0 185 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 SLC24A2Q9UI40 661 aa14.53□□□□□ -0.08
MSH2-206ENST00000543555 TCRBV7S3A2A0A539 114 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 FAM47DPA6NHR8 397 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 KRT81Q14533 505 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 RASA2Q15283 850 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 BOLA3Q53S33 107 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 SESTD1Q86VW0 696 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 MAP7D3Q8IWC1 876 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 CNPY4Q8N129 248 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 OR6B3Q8NGW1 331 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 PYROXD1Q8WU10 500 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 KHSRPQ92945 711 aaKnown RBP eCLIP14.52□□□□□ -0.086e-6■■■■□ 21.5
MSH2-206ENST00000543555 TRIM6Q9C030 488 aaPredicted RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 NGRNQ9NPE2 291 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 SLC5A4Q9NY91 659 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 GJD2Q9UKL4 321 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 GNEQ9Y223 722 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 KAT6AQ92794 2004 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 E7ESA3 106 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 PAPSS1O43252 624 aaPredicted RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 GABBR2O75899 941 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 OAS1P00973 400 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 GHRP10912 638 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 SDC4P31431 198 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 STIP1P31948 543 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 SREBF2Q12772 1141 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 PDK2Q15119 407 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 EFHC2Q5JST6 749 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 FBXW10Q5XX13 1052 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 NUGGCQ68CJ6 796 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 ARHGAP17Q68EM7 881 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 SCYL2Q6P3W7 929 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 DARS2Q6PI48 645 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 C17orf99Q6UX52 265 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 SCUBE3Q8IX30 993 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 ATP11CQ8NB49 1132 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 FAM172AQ8WUF8 416 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 TEKT4Q8WW24 435 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 SGSM3Q96HU1 749 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 MAGEB18Q96M61 343 aa14.52□□□□□ -0.08
MSH2-206ENST00000543555 WDR83Q9BRX9 315 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 XPO7Q9UIA9 1087 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 ZMYND8Q9ULU4 1186 aaPredicted RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 UBQLN1Q9UMX0 589 aaKnown RBP14.52□□□□□ -0.08
MSH2-206ENST00000543555 SCN1AP35498 2009 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 MYCP01106 439 aaPredicted RBP14.52□□□□□ -0.09
MSH2-206ENST00000543555 PHBP35232 272 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 NRLP54845 237 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 NOGQ13253 232 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 ZC3H18Q86VM9 953 aaKnown RBP14.52□□□□□ -0.09
MSH2-206ENST00000543555 STK32AQ8WU08 396 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 USP6NLQ92738 828 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 APOL6Q9BWW8 343 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 DPEP3Q9H4B8 488 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms