RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 TLR8Q9NR97 1041 aaKnown RBP17.16■□□□□ 0.34
CIT-212ENST00000543239 GKN1Q9NS71 199 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 ANO10Q9NW15 660 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 GMIPQ9P107 970 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 DLGAP2Q9P1A6 1054 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 HESX1Q9UBX0 185 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
CIT-212ENST00000543239 TSPAN16Q9UKR8 245 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 SCML2Q9UQR0 700 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 PCDHB4Q9Y5E5 795 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 COL4A3Q01955 1670 aa17.16■□□□□ 0.34
CIT-212ENST00000543239 MYH10P35580 1976 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 FAM170BA6NMN3 283 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 O00370 1275 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 NCAM2O15394 837 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 CD72P21854 359 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 EEF1GP26641 437 aaKnown RBP17.15■□□□□ 0.34
CIT-212ENST00000543239 MAGEA9P43362 315 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 KPNA1P52294 538 aaPredicted RBP17.15■□□□□ 0.34
CIT-212ENST00000543239 PTPN5P54829 565 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 STILQ15468 1287 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 STX1AQ16623 288 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 EXOC3L4Q17RC7 722 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 GOLGA7BQ2TAP0 167 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 CCDC186Q7Z3E2 898 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 TTC30AQ86WT1 665 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 RALGPS2Q86X27 583 aaPredicted RBP17.15■□□□□ 0.34
CIT-212ENST00000543239 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
CIT-212ENST00000543239 RBBP8NLQ8NC74 664 aaPredicted RBP17.15■□□□□ 0.34
CIT-212ENST00000543239 FAM3CQ92520 227 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 KREMEN1Q96MU8 473 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 TUBGCP2Q9BSJ2 902 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 IRF2BPLQ9H1B7 796 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 GTSE1Q9NYZ3 720 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 CNTN6Q9UQ52 1028 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 NFE2L3Q9Y4A8 694 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 USP3Q9Y6I4 520 aa17.15■□□□□ 0.34
CIT-212ENST00000543239 MUC6Q6W4X9 2439 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 KCNJ18B7U540 433 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 LEFTY2O00292 366 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 XPO1O14980 1071 aaKnown RBP17.14■□□□□ 0.33
CIT-212ENST00000543239 COCHO43405 550 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 MBL2P11226 248 aaPredicted RBP17.14■□□□□ 0.33
CIT-212ENST00000543239 TARSP26639 723 aaKnown RBP17.14■□□□□ 0.33
CIT-212ENST00000543239 CTHP32929 405 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 PSEN1P49768 467 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 ZNF132P52740 706 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 MFAP3P55082 362 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 TNK2Q07912 1038 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 BST2Q10589 180 aaKnown RBP17.14■□□□□ 0.33
CIT-212ENST00000543239 RUNX3Q13761 415 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 KCNJ12Q14500 433 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 RAB41Q5JT25 222 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 PIGZQ86VD9 579 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 DTWD2Q8NBA8 298 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 OSCP1Q8WVF1 389 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 CRACR2AQ9BSW2 395 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 NDST4Q9H3R1 872 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 UBE2TQ9NPD8 197 aaPredicted RBP17.14■□□□□ 0.33
CIT-212ENST00000543239 CYLDQ9NQC7 956 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 HPS4Q9NQG7 708 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 SAMSN1Q9NSI8 373 aaKnown RBP17.14■□□□□ 0.33
CIT-212ENST00000543239 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 CPQQ9Y646 472 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 MYO16Q9Y6X6 1858 aa17.14■□□□□ 0.33
CIT-212ENST00000543239 RNF225M0QZC1 329 aaPredicted RBP17.13■□□□□ 0.33
CIT-212ENST00000543239 CYP26A1O43174 497 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 DCNP07585 359 aaKnown RBP17.13■□□□□ 0.33
CIT-212ENST00000543239 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 SLC9A1P19634 815 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 RPS9P46781 194 aaKnown RBP17.13■□□□□ 0.33
CIT-212ENST00000543239 IFNAR2P48551 515 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 ZXDBP98169 803 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 TCF15Q12870 199 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 VWA3BQ502W6 1294 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 TCP11X2Q5H9J9 407 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 MIIPQ5JXC2 388 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 LCLAT1Q6UWP7 414 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 ZNF687Q8N1G0 1237 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 ZNF276Q8N554 614 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 ATP2A3Q93084 1043 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 CLDN23Q96B33 292 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 EBF3Q9H4W6 596 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 CCSER2Q9H7U1 834 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 DUS2Q9NX74 493 aaKnown RBP17.13■□□□□ 0.33
CIT-212ENST00000543239 TMEM63CQ9P1W3 806 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 MTF2Q9Y483 593 aaPredicted RBP17.13■□□□□ 0.33
CIT-212ENST00000543239 MIA3Q5JRA6 1907 aa17.13■□□□□ 0.33
CIT-212ENST00000543239 TLR5O60602 858 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 PON1P27169 355 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 PLA2G4AP47712 749 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 SOX9P48436 509 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 AMPD2Q01433 879 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 PDE4CQ08493 712 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 CNGA2Q16280 664 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 EML3Q32P44 896 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 PKDCCQ504Y2 493 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 HSP90AA4PQ58FG1 418 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms