RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PLD1Q13393 1074 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 VEPH1Q14D04 833 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 RAB41Q5JT25 222 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ARCQ7LC44 396 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 NUP93Q8N1F7 819 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 SCML4Q8N228 414 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ARHGAP18Q8N392 663 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ATAD1Q8NBU5 361 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ZMIZ2Q8NF64 920 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ZNF461Q8TAF7 563 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 TCF25Q9BQ70 676 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 CLSTN3Q9BQT9 956 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ULBP1Q9BZM6 244 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 TLR9Q9NR96 1032 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 COMMD8Q9NX08 183 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 STAP1Q9ULZ2 295 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 ALG6Q9Y672 507 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 SAR1BQ9Y6B6 198 aa16.17■□□□□ 0.18
VAMP1-207ENST00000539047 CCDC66A2RUB6 948 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 PRRG1O14668 218 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 CXCL14O95715 111 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 ATP1A1P05023 1023 aaKnown RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 LINC00271P0C7V0 271 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 HAPLN1P10915 354 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 PDGFRAP16234 1089 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 COMTP21964 271 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 ALDH1A3P47895 512 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 ZNF143P52747 638 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 SLC5A3P53794 718 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 CACNA2D1P54289 1103 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 DAOAP59103 153 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 RPL7AP62424 266 aaKnown RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 RAB33AQ14088 237 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 TAF12Q16514 161 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 HADHQ16836 314 aaKnown RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 PDE12Q6L8Q7 609 aaKnown RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 ELMSAN1Q6PJG2 1045 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 NT5DC3Q86UY8 548 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 NIPA2Q8N8Q9 360 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 BTBD6Q96KE9 485 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 SPATA17Q96L03 361 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 GDF15Q99988 308 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 C17orf80Q9BSJ5 609 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 CNPY3Q9BT09 278 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 RXFP1Q9HBX9 757 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 NGRNQ9NPE2 291 aaKnown RBP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.16■□□□□ 0.18
VAMP1-207ENST00000539047 MTUS1Q9ULD2 1270 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 SNX12Q9UMY4 172 aa16.16■□□□□ 0.18
VAMP1-207ENST00000539047 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 HHLA1C9JL84 531 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 DPYSL4O14531 572 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 PSTPIP1O43586 416 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 GRAP2O75791 330 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 GJB6O95452 261 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 LTFP02788 710 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 ATF2P15336 505 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 CETN2P41208 172 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 DNA2P51530 1060 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 YWHAZP63104 245 aaKnown RBP16.15■□□□□ 0.18
VAMP1-207ENST00000539047 CKAP4Q07065 602 aaKnown RBP16.15■□□□□ 0.18
VAMP1-207ENST00000539047 DUSP4Q13115 394 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 CLUL1Q15846 466 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 ZFYVE27Q5T4F4 411 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 CCDC181Q5TID7 509 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 PAPD7Q5XG87 772 aaKnown RBP16.15■□□□□ 0.18
VAMP1-207ENST00000539047 RSPO2Q6UXX9 243 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-207ENST00000539047 DENND5BQ6ZUT9 1274 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 RHOT1Q8IXI2 618 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 EMC1Q8N766 993 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 JOSD2Q8TAC2 188 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 POF1BQ8WVV4 589 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 AUTS2Q8WXX7 1259 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 GOLPH3Q9H4A6 298 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 CYP4F11Q9HBI6 524 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 POPDC2Q9HBU9 364 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 ALG13Q9NP73 1137 aaKnown RBP16.15■□□□□ 0.18
VAMP1-207ENST00000539047 RRN3Q9NYV6 651 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 TMEM59LQ9UK28 342 aa16.15■□□□□ 0.18
VAMP1-207ENST00000539047 ZNF638Q14966 1978 aaKnown RBP16.15■□□□□ 0.18
VAMP1-207ENST00000539047 C2CD4BA6NLJ0 364 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 SOX1O00570 391 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-207ENST00000539047 ADAM12O43184 909 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 NCK2O43639 380 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 PRLRP16471 622 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 CTNNA2P26232 953 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 PTPN9P43378 593 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 PTPROQ16827 1216 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 DDR2Q16832 855 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 PLPP4Q5VZY2 271 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 PPP2R2DQ66LE6 453 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
VAMP1-207ENST00000539047 GPRIN1Q7Z2K8 1008 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms