RNA–Protein interactions for RNA: ENST00000533717.5

PSMD13-213, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2

Gene PSMD13, Length 670 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-213ENST00000533717 PRRX2Q99811 253 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 FOXQ1Q9C009 403 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 RNF38Q9H0F5 515 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 NDST4Q9H3R1 872 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 TLR8Q9NR97 1041 aaKnown RBP16.44■□□□□ 0.22
PSMD13-213ENST00000533717 GKN1Q9NS71 199 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 GMIPQ9P107 970 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 HESX1Q9UBX0 185 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 TSPAN16Q9UKR8 245 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 SCML2Q9UQR0 700 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 SIT1Q9Y3P8 196 aa16.44■□□□□ 0.22
PSMD13-213ENST00000533717 RNF225M0QZC1 329 aaPredicted RBP16.43■□□□□ 0.22
PSMD13-213ENST00000533717 MAN2B1O00754 1011 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 CD72P21854 359 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 TUBP50607 506 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 KPNA1P52294 538 aaPredicted RBP16.43■□□□□ 0.22
PSMD13-213ENST00000533717 KIF11P52732 1056 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 BCAT1P54687 386 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 MTF1Q14872 753 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 VWA3BQ502W6 1294 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 TCP11X2Q5H9J9 407 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 MIIPQ5JXC2 388 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 HECTD3Q5T447 861 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 ZNF852Q6ZMS4 543 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 C11orf57Q6ZUT1 292 aaPredicted RBP16.43■□□□□ 0.22
PSMD13-213ENST00000533717 TTC16Q8NEE8 873 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 SH3RF2Q8TEC5 729 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 MSANTD3Q96H12 275 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 NELL2Q99435 816 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 FAM83CQ9BQN1 747 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 OSBPL6Q9BZF3 934 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 LTB4R2Q9NPC1 389 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 CNTN6Q9UQ52 1028 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 MRPS17Q9Y2R5 130 aaKnown RBP16.43■□□□□ 0.22
PSMD13-213ENST00000533717 PIAS3Q9Y6X2 628 aa16.43■□□□□ 0.22
PSMD13-213ENST00000533717 SHISA7A6NL88 538 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 O00370 1275 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 XPO1O14980 1071 aaKnown RBP16.42■□□□□ 0.22
PSMD13-213ENST00000533717 COCHO43405 550 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 PON1P27169 355 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 ZNF132P52740 706 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 MFAP3P55082 362 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 ZXDBP98169 803 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 TNK2Q07912 1038 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 PDE4CQ08493 712 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 BST2Q10589 180 aaKnown RBP16.42■□□□□ 0.22
PSMD13-213ENST00000533717 UBXN2BQ14CS0 331 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 PDGFRLQ15198 375 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 CDKAL1Q5VV42 579 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 LCLAT1Q6UWP7 414 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 CCDC186Q7Z3E2 898 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 PIGZQ86VD9 579 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 CCDC105Q8IYK2 499 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 TFAP2BQ92481 460 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 C8orf33Q9H7E9 229 aaPredicted RBP16.42■□□□□ 0.22
PSMD13-213ENST00000533717 CCSER2Q9H7U1 834 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 CPQQ9Y646 472 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 USP3Q9Y6I4 520 aa16.42■□□□□ 0.22
PSMD13-213ENST00000533717 FAM170BA6NMN3 283 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 LEFTY2O00292 366 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 CYP26A1O43174 497 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 DCNP07585 359 aaKnown RBP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 SETSIPP0DME0 302 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 MBL2P11226 248 aaPredicted RBP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 KRT5P13647 590 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 TARSP26639 723 aaKnown RBP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 PGFP49763 221 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 RUNX3Q13761 415 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 STILQ15468 1287 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 CNGA2Q16280 664 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 ITPRIPL2Q3MIP1 535 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 RAB41Q5JT25 222 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 TRIM68Q6AZZ1 485 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 CAVIN1Q6NZI2 390 aaKnown RBP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 GJB7Q6PEY0 223 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 C1orf228Q6PIY5 440 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 DDX42Q86XP3 938 aaKnown RBP eCLIP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 KIAA1958Q8N8K9 716 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 OSCP1Q8WVF1 389 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 FAM3CQ92520 227 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 EBF3Q9H4W6 596 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 HPS4Q9NQG7 708 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 DUS2Q9NX74 493 aaKnown RBP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 DLGAP2Q9P1A6 1054 aa16.41■□□□□ 0.22
PSMD13-213ENST00000533717 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
PSMD13-213ENST00000533717 F5P12259 2224 aa16.4■□□□□ 0.22
PSMD13-213ENST00000533717 SPECC1L-ADORA2AF8WAN1 911 aa16.4■□□□□ 0.22
PSMD13-213ENST00000533717 TULP2O00295 520 aa16.4■□□□□ 0.22
PSMD13-213ENST00000533717 PES1O00541 588 aaKnown RBP16.4■□□□□ 0.22
PSMD13-213ENST00000533717 NCAM2O15394 837 aa16.4■□□□□ 0.22
PSMD13-213ENST00000533717 GALR2O43603 387 aaPredicted RBP16.4■□□□□ 0.22
PSMD13-213ENST00000533717 TLR5O60602 858 aa16.4■□□□□ 0.22
PSMD13-213ENST00000533717 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
PSMD13-213ENST00000533717 CTHP32929 405 aa16.4■□□□□ 0.22
PSMD13-213ENST00000533717 PLA2G4AP47712 749 aa16.4■□□□□ 0.22
PSMD13-213ENST00000533717 SOX9P48436 509 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms