RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 PDAP1Q13442 181 aaKnown RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 IMPG1Q17R60 797 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 FASTKD1Q53R41 847 aaKnown RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 RD3Q7Z3Z2 195 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 GSPT2Q8IYD1 628 aaKnown RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 RGL4Q8IZJ4 473 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 B3GALNT2Q8NCR0 500 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 FAM71BQ8TC56 605 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 SMG7Q92540 1137 aaKnown RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 DRC3Q9H069 523 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 PLCH1Q4KWH8 1693 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 ZMYM2Q9UBW7 1377 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 SMIM28A0A1B0GU29 152 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 E5RJQ4 531 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 CLDN5O00501 218 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 TSPAN1O60635 241 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 HSPA4LO95757 839 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 HIST1H2AGP0C0S8 130 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 HIST1H2ADP20671 130 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 NCKAP1LP55160 1127 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 PREPLQ4J6C6 727 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 BSNDQ8WZ55 320 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 HIST1H2AHQ96KK5 128 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 HIST1H2AJQ99878 128 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 H2AFJQ9BTM1 129 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 PACSIN1Q9BY11 444 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 PARD6BQ9BYG5 372 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 UBXN6Q9BZV1 441 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 SLC13A1Q9BZW2 595 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 NT5MQ9NPB1 228 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 GTSE1Q9NYZ3 720 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 GTF2IRD1Q9UHL9 959 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 NOVA2Q9UNW9 492 aaKnown RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 C2CD2Q9Y426 696 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 GRID2IPA4D2P6 1211 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 LTFP02788 710 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 TYK2P29597 1187 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 KLHL38Q2WGJ6 581 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 MAB21L3Q8N8X9 362 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 TRIB2Q92519 343 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 AIPL1Q9NZN9 384 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 OGFRQ9NZT2 677 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 VANGL2Q9ULK5 521 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 TRDMT1O14717 391 aaKnown RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 MTSS1O43312 755 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 PAEPP09466 180 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 POLR2EP19388 210 aaKnown RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 GCNT1Q02742 428 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 FOXD4Q12950 439 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RCN2Q14257 317 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ATAT1Q5SQI0 421 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RETSATQ6NUM9 610 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 DNAJC19Q96DA6 116 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 NIFKQ9BYG3 293 aaKnown RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 NFKBIZQ9BYH8 718 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ARHGEF38Q9NXL2 777 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 SMARCAL1Q9NZC9 954 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RWDD3Q9Y3V2 267 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 IGLV3-22A0A075B6J6 115 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RAMP2O60895 175 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 LYPLA2O95372 231 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 COPS2P61201 443 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 NCAPHQ15003 741 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RBBP7Q16576 425 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ZNF792Q3KQV3 632 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 LDLRAD1Q5T700 205 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 C20orf96Q9NUD7 363 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 NPR3P17342 541 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 PBLDP30039 288 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ARHGAP25P42331 645 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 KCNJ1P48048 391 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 LBRQ14739 615 aaKnown RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 E2F5Q15329 346 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 C9orf57Q5W0N0 161 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 TBC1D1Q86TI0 1168 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 DENND1CQ8IV53 801 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 SUSD6Q92537 303 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 KAT5Q92993 513 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 TRIM51Q9BSJ1 452 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 DCLK3Q9C098 648 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 MAF1Q9H063 256 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 IKZF4Q9H2S9 585 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ZCCHC17Q9NP64 241 aaKnown RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ABCC13Q9NSE7 274 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 DNMT3LQ9UJW3 386 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ASTN1O14525 1302 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 CCDC195A0A1B0GUA6 201 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 ARL5CA6NH57 179 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RASA4BC9J798 803 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 AP3B1O00203 1094 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 KPNA3O00505 521 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 SLC9A3R1O14745 358 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RASA4O43374 803 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 RARGP13631 454 aa8.26□□□□□ -1.09
CTNND1-230ENST00000532245 PBX3P40426 434 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms