RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.75□□□□□ -1.81
CD44-229ENST00000528672 FITM2Q8N6M3 262 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 AMER2Q8N7J2 671 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 PCYOX1LQ8NBM8 494 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 SLC16A11Q8NCK7 471 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 SIMC1Q8NDZ2 872 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 CACTINQ8WUQ7 758 aaKnown RBP3.75□□□□□ -1.81
CD44-229ENST00000528672 AFG1LQ8WV93 481 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 RILPL2Q969X0 211 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 SLC46A1Q96NT5 459 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 MOGAT1Q96PD6 335 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 TSPAN18Q96SJ8 248 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 ZNF747Q9BV97 191 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 SPATA5L1Q9BVQ7 753 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 OSBPL5Q9H0X9 879 aaPredicted RBP3.75□□□□□ -1.81
CD44-229ENST00000528672 TAF1DQ9H5J8 278 aaPredicted RBP3.75□□□□□ -1.81
CD44-229ENST00000528672 MLXIPQ9HAP2 919 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 ALG13Q9NP73 1137 aaKnown RBP3.75□□□□□ -1.81
CD44-229ENST00000528672 XPNPEP3Q9NQH7 507 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 SLC2A4RGQ9NR83 387 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 PARPBPQ9NWS1 579 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 IRAK4Q9NWZ3 460 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 CEP72Q9P209 647 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 ANKFY1Q9P2R3 1169 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 EIF2B4Q9UI10 523 aaKnown RBP3.75□□□□□ -1.81
CD44-229ENST00000528672 CAPN11Q9UMQ6 739 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 MTO1Q9Y2Z2 717 aaKnown RBP3.75□□□□□ -1.81
CD44-229ENST00000528672 HS3ST4Q9Y661 456 aa3.75□□□□□ -1.81
CD44-229ENST00000528672 A0A1B0GTW7 788 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 H7C4K7 107 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 TCERG1O14776 1098 aaKnown RBP3.74□□□□□ -1.81
CD44-229ENST00000528672 CCP110O43303 1012 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 ANP32CO43423 234 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 ZNF500O60304 480 aaPredicted RBP3.74□□□□□ -1.81
CD44-229ENST00000528672 ACTL6BO94805 426 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 NDUFA10O95299 355 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 GLP2RO95838 553 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 CKBP12277 381 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 GYS1P13807 737 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 GCSHP23434 173 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 GATA3P23771 443 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 YY1P25490 414 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 ATICP31939 592 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 AARSP49588 968 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD44-229ENST00000528672 TUBP50607 506 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 WNT3P56703 355 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 LILRA4P59901 499 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 AP2B1P63010 937 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 NSUN2Q08J23 767 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD44-229ENST00000528672 MAPK7Q13164 816 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 CRHR2Q13324 411 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 CUL4BQ13620 913 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 KCNAB1Q14722 419 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 NPY5RQ15761 445 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 TRIM71Q2Q1W2 868 aaKnown RBP3.74□□□□□ -1.81
CD44-229ENST00000528672 PLA1AQ53H76 456 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 ATPAF1Q5TC12 328 aaPredicted RBP3.74□□□□□ -1.81
CD44-229ENST00000528672 FAXCQ5TGI0 409 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 ZNF280DQ6N043 979 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 MRNIPQ6NTE8 343 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 TAPT1Q6NXT6 567 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 CPOQ8IVL8 374 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 HERC6Q8IVU3 1022 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 C1orf210Q8IVY1 113 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 CCDC28AQ8IWP9 274 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 GSPT2Q8IYD1 628 aaKnown RBP3.74□□□□□ -1.81
CD44-229ENST00000528672 PSD4Q8NDX1 1056 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 THAP4Q8WY91 577 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 HERVK_113Q902F9 699 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 ZBTB10Q96DT7 871 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 SORCS2Q96PQ0 1159 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 NELL2Q99435 816 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 RTKNQ9BST9 563 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 PABPC3Q9H361 631 aaKnown RBP3.74□□□□□ -1.81
CD44-229ENST00000528672 JMJD4Q9H9V9 463 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 BLOC1S4Q9NUP1 217 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 FAM30AQ9NZY2 134 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 FEM1BQ9UK73 627 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 CA14Q9ULX7 337 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 AFG3L2Q9Y4W6 797 aa3.74□□□□□ -1.81
CD44-229ENST00000528672 AQP7P3A6NL99 342 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 B4E171 279 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 POLRMTO00411 1230 aaKnown RBP3.73□□□□□ -1.81
CD44-229ENST00000528672 TRIM24O15164 1050 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 FIBPO43427 364 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 DNPH1O43598 174 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 FSHBP01225 129 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SRGAP2BP0DMP2 458 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 ATP1A3P13637 1013 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 C6P13671 934 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 PECAM1P16284 738 aaPredicted RBP3.73□□□□□ -1.81
CD44-229ENST00000528672 ACVRL1P37023 503 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 VIPR2P41587 438 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TSPAN7P41732 249 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 LIFRP42702 1097 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 GDF5P43026 501 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 PTDSS1P48651 473 aaKnown RBP3.73□□□□□ -1.81
CD44-229ENST00000528672 PNLIPRP1P54315 467 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 BCAT1P54687 386 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 ALDH18A1P54886 795 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms