RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 HOXA5P20719 270 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 COMTP21964 271 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 FGFR4P22455 802 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 FDXRP22570 491 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 GCSHP23434 173 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ADORA1P30542 326 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 HIBADHP31937 336 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 PPM1AP35813 382 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ITGA8P53708 1063 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 PDE1AP54750 535 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 FAM189BP81408 668 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 TFCP2Q12800 502 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 G3BP1Q13283 466 aaKnown RBP eCLIP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 SLC35G1Q2M3R5 365 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 GRAMD1BQ3KR37 738 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 LRRC24Q50LG9 513 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 FAM102AQ5T9C2 384 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 TAPT1Q6NXT6 567 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 TAF2Q6P1X5 1199 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 CCDC174Q6PII3 467 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 SPOCD1Q6ZMY3 1216 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 KCTD20Q7Z5Y7 419 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZNF280BQ86YH2 543 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 PDSS2Q86YH6 399 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 CFAP52Q8N1V2 620 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 OR56A1Q8NGH5 318 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZNF483Q8TF39 744 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 NMD3Q96D46 503 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 LRRC46Q96FV0 321 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 SNX22Q96L94 193 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 NEUROD6Q96NK8 337 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 SLC46A1Q96NT5 459 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 RBM15Q96T37 977 aaKnown RBP eCLIP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 UNKQ9C0B0 810 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 IL25Q9H293 177 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 BOLA2Q9H3K6 86 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZNF768Q9H5H4 540 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 UPF2Q9HAU5 1272 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 STARD7Q9NQZ5 370 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 CWC25Q9NXE8 425 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 XPR1Q9UBH6 696 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 HESX1Q9UBX0 185 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 EIF2B4Q9UI10 523 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 SORCS3Q9UPU3 1222 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 TMX2Q9Y320 296 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 COL22A1Q8NFW1 1626 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ITGB4P16144 1822 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 AFDNP55196 1824 aaKnown RBP3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ADAMTS7Q9UKP4 1686 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ABCC6O95255 1503 aa3.14□□□□□ -1.91
CKS1BP7-201ENST00000522230 ARFGEF2Q9Y6D5 1785 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 BCL9O00512 1426 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 A0A087WWL8 130 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 A0A1W2PPC4 97 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 PATE3B3GLJ2 98 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 PYCARD-AS1I3L0S3 204 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 SNAP23O00161 211 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 POLRMTO00411 1230 aaKnown RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 TCEA3O75764 348 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 RASSF9O75901 435 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 SCAF4O95104 1147 aaKnown RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 STARD3NLO95772 234 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 NDST3O95803 873 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 ITGB3P05106 788 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 FGFR2P21802 821 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 HSPA7P48741 367 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 CARSP49589 748 aaKnown RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZNF134P52741 427 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 LILRA4P59901 499 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 HHEXQ03014 270 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 OCA2Q04671 838 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 CRHR2Q13324 411 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 RAB32Q13637 225 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 DHX8Q14562 1220 aaKnown RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 RRP1BQ14684 758 aaKnown RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 MPEG1Q2M385 716 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZIK1Q3SY52 487 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 BMP2KLQ5H9B9 411 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 DCAF17Q5H9S7 520 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 ZFYVE27Q5T4F4 411 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 AGAP9Q5VTM2 703 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 SUSD4Q5VX71 490 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 IZUMO3Q5VZ72 239 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 FAM160B1Q5W0V3 765 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 LMBRD2Q68DH5 695 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 DRICH1Q6PGQ1 229 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 MAMDC4Q6UXC1 1216 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 CCDC129Q6ZRS4 1044 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 PPP1R32Q7Z5V6 425 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 DPP9Q86TI2 863 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 PALM2Q8IXS6 379 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 GSPT2Q8IYD1 628 aaKnown RBP3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 TXLNBQ8N3L3 684 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 AOPEPQ8N6M6 819 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 ATP11CQ8NB49 1132 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 PSD4Q8NDX1 1056 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 DNERQ8NFT8 737 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 CPT1CQ8TCG5 803 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 SSH3Q8TE77 659 aa3.13□□□□□ -1.91
CKS1BP7-201ENST00000522230 LOXL4Q96JB6 756 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms