RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 GANQ9H2C0 597 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 UBE2TQ9NPD8 197 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-212ENST00000519661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.17□□□□□ -0.468e-7■■■■■ 253.8
SPIDR-212ENST00000519661 PCDHGC3Q9UN70 934 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 ANAPC1Q9H1A4 1944 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 TRAV19A0A0A6YYK7 116 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 SMTNL1A8MU46 457 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 AVPR1AP37288 418 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 VIPR2P41587 438 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 GPD2P43304 727 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 CLCN5P51795 746 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 COPB1P53618 953 aaKnown RBP12.16□□□□□ -0.46
SPIDR-212ENST00000519661 SLC8A3P57103 927 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 GPC5P78333 572 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 PDE4CQ08493 712 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 ZSCAN23Q3MJ62 389 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 ZNF394Q53GI3 561 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 FBXL6Q8N531 539 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 STKLD1Q8NE28 680 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 RIN3Q8TB24 985 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 BPIFB1Q8TDL5 484 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 LHX5Q9H2C1 402 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 SMOC2Q9H3U7 446 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 MAGED2Q9UNF1 606 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-212ENST00000519661 PCDHB4Q9Y5E5 795 aa12.16□□□□□ -0.46
SPIDR-212ENST00000519661 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
SPIDR-212ENST00000519661 CACNA1HO95180 2353 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 KRBA1A5PL33 1030 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 C2orf78A6NCI8 922 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 GREM1O60565 184 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 GABBR2O75899 941 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 ADORA2BP29275 332 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 CDH5P33151 784 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-212ENST00000519661 CDR1P51861 262 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 JAM2P57087 298 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 ZXDBP98169 803 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 GOLGA7BQ2TAP0 167 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 HFE2Q6ZVN8 426 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 SCD5Q86SK9 330 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 DDX42Q86XP3 938 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPIDR-212ENST00000519661 ARHGAP18Q8N392 663 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 AOPEPQ8N6M6 819 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 MAB21L3Q8N8X9 362 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 ANKRD20A12PQ8NF67 263 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 ZNF606Q8WXB4 792 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 IRGQQ8WZA9 623 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 FBXO32Q969P5 355 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 CDK5RAP1Q96SZ6 601 aaKnown RBP12.15□□□□□ -0.46
SPIDR-212ENST00000519661 SLC4A5Q9BY07 1137 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 STK33Q9BYT3 514 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 RNF38Q9H0F5 515 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 SLITRK6Q9H5Y7 841 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 CNGB3Q9NQW8 809 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
SPIDR-212ENST00000519661 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPIDR-212ENST00000519661 HESX1Q9UBX0 185 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 DNAJC12Q9UKB3 198 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 AJAP1Q9UKB5 411 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-212ENST00000519661 CCL26Q9Y258 94 aa12.15□□□□□ -0.46
SPIDR-212ENST00000519661 MUC6Q6W4X9 2439 aa12.15□□□□□ -0.47
SPIDR-212ENST00000519661 A0A1B0GTH6 734 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 A0A1W2PQC6 194 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 SYCE3A1L190 88 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 F8VZ95 297 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 COCHO43405 550 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 MED7O43513 233 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 CLSTN1O94985 981 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 ATP1A3P13637 1013 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 HDCP19113 662 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 AOC1P19801 751 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 CLCN1P35523 988 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 PGFP49763 221 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 BPIFB4P59827 614 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 APBA1Q02410 837 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 PDGFRLQ15198 375 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 HECTD3Q5T447 861 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 CWF19L1Q69YN2 538 aaKnown RBP12.14□□□□□ -0.47
SPIDR-212ENST00000519661 GJB7Q6PEY0 223 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 TMEM110Q86TL2 294 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 DDX1Q92499 740 aaKnown RBP12.14□□□□□ -0.47
SPIDR-212ENST00000519661 OTUB2Q96DC9 234 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 SHDQ96IW2 340 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 NELL2Q99435 816 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
SPIDR-212ENST00000519661 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 TAB2Q9NYJ8 693 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 GMIPQ9P107 970 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
SPIDR-212ENST00000519661 E2F8A0AVK6 867 aa12.13□□□□□ -0.47
SPIDR-212ENST00000519661 TULP2O00295 520 aa12.13□□□□□ -0.47
SPIDR-212ENST00000519661 FOXN3O00409 490 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-212ENST00000519661 ZNF263O14978 683 aa12.13□□□□□ -0.47
SPIDR-212ENST00000519661 TLR5O60602 858 aa12.13□□□□□ -0.47
SPIDR-212ENST00000519661 FBXO21O94952 628 aa12.13□□□□□ -0.47
SPIDR-212ENST00000519661 ZBED1O96006 694 aa12.13□□□□□ -0.47
SPIDR-212ENST00000519661 CKMP06732 381 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms