RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PI4K2BG5E9Z4 385 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 I3L4J1 428 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 LIASO43766 372 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 HSF2BPO75031 334 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 GRAP2O75791 330 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FBXO21O94952 628 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 OAZ2O95190 189 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PARNO95453 639 aaKnown RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 ECEL1O95672 775 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SYF2O95926 243 aaKnown RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 CD48P09326 243 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FAM200BP0CF97 657 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 KRT10P13645 584 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 LCP1P13796 627 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TFE3P19532 575 aaPredicted RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 IL4RP24394 825 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 KLRC2P26717 231 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SDC4P31431 198 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 GBP1P32455 592 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 GJC1P36383 396 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 MATKP42679 507 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TNNT3P45378 269 aaPredicted RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 BRCC3P46736 316 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 NDUFV1P49821 464 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 HDAC4P56524 1084 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SLC8A3P57103 927 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 MRPS5P82675 430 aaKnown RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FAAP100Q0VG06 881 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SNX1Q13596 522 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PTK6Q13882 451 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PDK2Q15119 407 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 OASLQ15646 514 aaKnown RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TCTN1Q2MV58 587 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SMTNL2Q2TAL5 461 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 INTS6LQ5JSJ4 861 aaKnown RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SLC39A5Q6ZMH5 540 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 BBS12Q6ZW61 710 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 STRADAQ7RTN6 431 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FAM35AQ86V20 835 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 LRRTM3Q86VH5 581 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 METTL23Q86XA0 190 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SCML4Q8N228 414 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 KCTD6Q8NC69 237 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SLC35B2Q8TB61 432 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 URGCPQ8TCY9 931 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 GRK7Q8WTQ7 553 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FAM172AQ8WUF8 416 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 ATG4AQ8WYN0 398 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PIK3R5Q8WYR1 880 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SEPT8Q92599 483 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 APBB2Q92870 758 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 ART4Q93070 314 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SMARCD1Q96GM5 515 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 GDAP1L1Q96MZ0 367 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TOX2Q96NM4 488 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 CASD1Q96PB1 797 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SLC2A13Q96QE2 648 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TBCBQ99426 244 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 BEGAINQ9BUH8 593 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FRMD8P1Q9BZ68 369 aaPredicted RBP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 ZWILCHQ9H900 591 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TMEM30AQ9NV96 361 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TBC1D13Q9NVG8 400 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 KLHL11Q9NVR0 708 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 WHRNQ9P202 907 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PCSK1NQ9UHG2 260 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PCDHB8Q9UN66 801 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 SNX24Q9Y343 169 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PCDHB7Q9Y5E2 793 aa5.68□□□□□ -1.5
SCARNA20.4-201ENST00000516969 LTBP2Q14767 1821 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PLXNA3P51805 1871 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 H0YGN5 161 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 H3BQF6 201 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 NRP1O14786 923 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 MDM4O15151 490 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PRPSAP2O60256 369 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 CST8O60676 142 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PQBP1O60828 265 aaKnown RBP5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 PPFIA2O75334 1257 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 DAB1O75553 588 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 AP1G2O75843 785 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 FYNP06241 537 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 ITGAVP06756 1048 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 ITIH2P19823 946 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 L1CAMP32004 1257 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 NOS2P35228 1153 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 GGCXP38435 758 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 TKTL1P51854 596 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 CACNA2D1P54289 1103 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 VCPP55072 806 aaKnown RBP5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 MAP3K7CLP57077 242 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 DAOAP59103 153 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 YWHAZP63104 245 aaKnown RBP5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 CBX1P83916 185 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 ATP11AP98196 1134 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 LMNB2Q03252 620 aa5.67□□□□□ -1.5
SCARNA20.4-201ENST00000516969 KRT17Q04695 432 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms