RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 EPN1Q9Y6I3 576 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 DOCK8Q8NF50 2099 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 DOCK6Q96HP0 2047 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 MTCL1Q9Y4B5 1905 aaKnown RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 ARHGAP6O43182 974 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 SART1O43290 800 aaKnown RBP10.69□□□□□ -0.7
NEDD9-214ENST00000513989 ZMYND10O75800 440 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 SEC24AO95486 1093 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 FGF19O95750 216 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 FTLP02792 175 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-214ENST00000513989 CYP1A1P04798 512 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-214ENST00000513989 MYBL1P10243 752 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 UNGP13051 313 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-214ENST00000513989 HOXA9P31269 272 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 PPP3CCP48454 512 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 CDR1P51861 262 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 KIF11P52732 1056 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 PABPC1LQ4VXU2 614 aaKnown RBP10.69□□□□□ -0.7
NEDD9-214ENST00000513989 PKDCCQ504Y2 493 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 E4F1Q66K89 784 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-214ENST00000513989 SYCE2Q6PIF2 218 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 TMEM110Q86TL2 294 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 PIGZQ86VD9 579 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 ARHGAP18Q8N392 663 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 LEMD2Q8NC56 503 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 GIPC2Q8TF65 315 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 PCDHB18PQ96TA0 734 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 ZSWIM1Q9BR11 485 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 TRIM62Q9BVG3 475 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 S1PR5Q9H228 398 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 PIDD1Q9HB75 910 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 CNGB3Q9NQW8 809 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 WDR35Q9P2L0 1181 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 INSL5Q9Y5Q6 135 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 ANK1P16157 1881 aa10.69□□□□□ -0.7
NEDD9-214ENST00000513989 RIF1Q5UIP0 2472 aaKnown RBP10.69□□□□□ -0.7
NEDD9-214ENST00000513989 SCN1AP35498 2009 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 CCDC195A0A1B0GUA6 201 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 SLC38A8A6NNN8 435 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 TMCO5BA8MYB1 307 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 DDX3XO00571 662 aaKnown RBP eCLIP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 BEST1O76090 585 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 PLEKP08567 350 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 CFHP08603 1231 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 POU2F2P09086 479 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 LCP1P13796 627 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 EPCAMP16422 314 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 DESP17661 470 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 PTPN2P17706 415 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 FECHP22830 423 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 YWHAQP27348 245 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 MAGEA1P43355 309 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 NOMO3P69849 1222 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 GFPT1Q06210 699 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 PDCLQ13371 301 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 ZNF268Q14587 947 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 CCDC142Q17RM4 750 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 ASTE1Q2TB18 679 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 CYP4A22Q5TCH4 519 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 CES5AQ6NT32 575 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 PMF1Q6P1K2 205 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 DNAJB7Q7Z6W7 309 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 MON1AQ86VX9 555 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 PHF13Q86YI8 300 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 WDTC1Q8N5D0 677 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 C1orf131Q8NDD1 294 aaKnown RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 CMASQ8NFW8 434 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 SLC30A5Q8TAD4 765 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 EDAQ92838 391 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 TRIM44Q96DX7 344 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 SLITRK1Q96PX8 696 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 SLC4A5Q9BY07 1137 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 RHOBTB2Q9BYZ6 727 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 PRKD2Q9BZL6 878 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 SFXN1Q9H9B4 322 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 NAGPAQ9UK23 515 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 MAGED2Q9UNF1 606 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-214ENST00000513989 YIPF1Q9Y548 306 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 TRIP11Q15643 1979 aa10.68□□□□□ -0.7
NEDD9-214ENST00000513989 A0A087X0T9 212 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 ANKRD62A6NC57 917 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 EIF3CLB5ME19 914 aaKnown RBP10.67□□□□□ -0.7
NEDD9-214ENST00000513989 ZNF197O14709 1029 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 CCL16O15467 120 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 SOAT2O75908 522 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 NDUFA10O95299 355 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 VNN2O95498 520 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 ZBED1O96006 694 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 H2AFZP0C0S5 128 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 FAM228BP0C875 321 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 MMP8P22894 467 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 GABRB2P47870 512 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 RPL34P49207 117 aaKnown RBP10.67□□□□□ -0.7
NEDD9-214ENST00000513989 PSEN1P49768 467 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 RGS7P49802 495 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 TKTL1P51854 596 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 SLC5A3P53794 718 aa10.67□□□□□ -0.7
NEDD9-214ENST00000513989 GPC5P78333 572 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms