RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SERPING1P05155 500 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 MMEP08473 750 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 PTPN2P17706 415 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 GPD2P43304 727 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 SLC5A3P53794 718 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 ADKP55263 362 aaKnown RBP8□□□□□ -1.13
HMGXB3-204ENST00000513318 FMO1Q01740 532 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 PDCLQ13371 301 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 TAF12Q16514 161 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 RARS2Q5T160 578 aaKnown RBP8□□□□□ -1.13
HMGXB3-204ENST00000513318 SDHAF4Q5VUM1 108 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 TAF3Q5VWG9 929 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 CES5AQ6NT32 575 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 TMC5Q6UXY8 1006 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 GPR149Q86SP6 731 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 PIGZQ86VD9 579 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 NUP93Q8N1F7 819 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 LEMD2Q8NC56 503 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 GIPC2Q8TF65 315 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 STK32AQ8WU08 396 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 SLC20A1Q8WUM9 679 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 SLC35F5Q8WV83 523 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 KCTD13Q8WZ19 329 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 SECISBP2LQ93073 1101 aaKnown RBP8□□□□□ -1.13
HMGXB3-204ENST00000513318 HLA-CQ95604 372 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 HSFY1Q96LI6 401 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 RIPOR3Q96MK2 946 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 NOX5Q96PH1 765 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 SYT11Q9BT88 431 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 TTLL2Q9BWV7 592 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 UBXN6Q9BZV1 441 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 ADAM7Q9H2U9 754 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 KDM4CQ9H3R0 1056 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 FBXO44Q9H4M3 255 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 HAUS4Q9H6D7 363 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 PIDD1Q9HB75 910 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 LRRC4Q9HBW1 653 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 CYLDQ9NQC7 956 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 ASAH2Q9NR71 780 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 ZNHIT6Q9NWK9 470 aaKnown RBP8□□□□□ -1.13
HMGXB3-204ENST00000513318 COMMD8Q9NX08 183 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 UXTQ9UBK9 157 aaPredicted RBP8□□□□□ -1.13
HMGXB3-204ENST00000513318 CD207Q9UJ71 328 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 COL6A3P12111 3177 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 SSU72P8A0A1W2PR75 194 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 FAM92AA1XBS5 289 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 TULP2O00295 520 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 TNFRSF10BO14763 440 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 FGF19O95750 216 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 CYP1A1P04798 512 aaPredicted RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 HMGA1P17096 107 aaKnown RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 CHRNB2P17787 502 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 TNFAIP3P21580 790 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 KCNA5P22460 613 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 CDC25CP30307 473 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 MTHFRP42898 656 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 ACADSBP45954 432 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 KIF11P52732 1056 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 EPHA5P54756 1037 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 SNX16P57768 344 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 NOMO3P69849 1222 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 CENPCQ03188 943 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 ADIGQ0VDE8 80 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 IFRD2Q12894 506 aaPredicted RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 SMAD4Q13485 552 aaKnown RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 MTMR3Q13615 1198 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 PABPC1LQ4VXU2 614 aaKnown RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 RAB41Q5JT25 222 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 CYP4A22Q5TCH4 519 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 HGSNATQ68CP4 663 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 PPP1R2P3Q6NXS1 205 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 PMF1Q6P1K2 205 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 DENND1BQ6P3S1 775 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 PDZD4Q76G19 769 aaPredicted RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 GPRIN1Q7Z2K8 1008 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 DNAJB7Q7Z6W7 309 aaPredicted RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 VPS36Q86VN1 386 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 TMC8Q8IU68 726 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 PASD1Q8IV76 773 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 SCML4Q8N228 414 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 C12orf76Q8N812 135 aaPredicted RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 TC2NQ8N9U0 490 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 SPC24Q8NBT2 197 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 TMEM35BQ8NCS4 154 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 MSANTD4Q8NCY6 345 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 C1orf131Q8NDD1 294 aaKnown RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 STKLD1Q8NE28 680 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 PDZD8Q8NEN9 1154 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 UBA3Q8TBC4 463 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 GPR152Q8TDT2 470 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 IPO4Q8TEX9 1081 aaKnown RBP7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 OVCA2Q8WZ82 227 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 MYRFLQ96LU7 910 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 NECTIN4Q96NY8 510 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 SLITRK1Q96PX8 696 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 GCNAQ96QF7 691 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 AGPAT1Q99943 283 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 CORO1BQ9BR76 489 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 S1PR5Q9H228 398 aa7.99□□□□□ -1.13
HMGXB3-204ENST00000513318 AVENQ9NQS1 362 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms