RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 H2AFY2Q9P0M6 372 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TCRBV5S4A2TA0A5A2 114 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 VPS26AO75436 327 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ILF2Q12905 390 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 SPDYCQ5MJ68 293 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ADCK2Q7Z695 626 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 VPS50Q96JG6 964 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 BRD8Q9H0E9 1235 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 AP4E1Q9UPM8 1137 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 RIPK2O43353 540 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TOMM70O94826 608 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 PMS1P54277 932 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 CSTF3Q12996 717 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 RASA2Q15283 850 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 HIST2H2AA3Q6FI13 130 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ATXN2LQ8WWM7 1075 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TMEM176AQ96HP8 235 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 WWOXQ9NZC7 414 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 NAALADL1Q9UQQ1 740 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 DNAJC16Q9Y2G8 782 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ACOT9Q9Y305 439 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TRMT5Q32P41 509 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 MCOLN2Q8IZK6 566 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 EIF1ADQ8N9N8 165 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 PHF21AQ96BD5 680 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TMEM120AQ9BXJ8 343 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 SEMA4AQ9H3S1 761 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 AGO4Q9HCK5 861 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 NMRK1Q9NWW6 199 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 LZTS1Q9Y250 596 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 MAGEB16A2A368 324 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 CPA3P15088 417 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 RGS2P41220 211 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 PEX5P50542 639 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 MTDHQ86UE4 582 aaKnown RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 TBCBQ99426 244 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 THUMPD3Q9BV44 507 aaKnown RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 UBOX5O94941 541 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 SERPIND1P05546 499 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 STAG3L1P0CL83 205 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 VCAM1P19320 739 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 CYP2B6P20813 491 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 GCNT1Q02742 428 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 MGAT5Q09328 741 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 TRIM60Q495X7 471 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 TMEM119Q4V9L6 283 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 C2CD6Q53TS8 623 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 HES6Q96HZ4 224 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 RNF112Q9ULX5 631 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 SKAP2O75563 359 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 ALDH1A3P47895 512 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 NFIAQ12857 509 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 ZNF177Q13360 481 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 SGO1Q5FBB7 561 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 KCND1Q9NSA2 647 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 SERPINB5P36952 375 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 CHRNB3Q05901 458 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 MEA1Q16626 185 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 TMC3Q7Z5M5 1100 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 CNBD2Q96M20 576 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 SHCBP1LQ9BZQ2 653 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 SYTL2Q9HCH5 934 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 EXOSC4Q9NPD3 245 aaKnown RBP12.88□□□□□ -0.35
COL11A1-210ENST00000512756 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
COL11A1-210ENST00000512756 CCL15-CCL14A0A0B4J2E2 113 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 RPLP2P05387 115 aaKnown RBP12.87□□□□□ -0.35
COL11A1-210ENST00000512756 ATP6V1B1P15313 513 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 PSMC3P17980 439 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 BACE1P56817 501 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 CCL15Q16663 113 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 STRA8Q7Z7C7 330 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 BLOC1S5Q8TDH9 187 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 ABHD8Q96I13 439 aa12.87□□□□□ -0.35
COL11A1-210ENST00000512756 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms