RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 CASP5P51878 434 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 USP46P62068 366 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 SNRPFP62306 86 aaKnown RBP10.65□□□□□ -0.7
SH3D21-206ENST00000508854 ZXDBP98169 803 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 AMPD3Q01432 767 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 SEMA3BQ13214 749 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 GAB4Q2WGN9 574 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 MAP7D1Q3KQU3 841 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 MDH1BQ5I0G3 518 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 PEAR1Q5VY43 1037 aaPredicted RBP10.65□□□□□ -0.7
SH3D21-206ENST00000508854 USP49Q70CQ1 688 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 TRAPPC11Q7Z392 1133 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 ZSWIM2Q8NEG5 633 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 RLN3Q8WXF3 142 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 ZCCHC14Q8WYQ9 949 aaKnown RBP10.65□□□□□ -0.7
SH3D21-206ENST00000508854 TMEM121BQ9BXQ6 578 aaPredicted RBP10.65□□□□□ -0.7
SH3D21-206ENST00000508854 COMMD8Q9NX08 183 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 SMPD4Q9NXE4 827 aa10.65□□□□□ -0.7
SH3D21-206ENST00000508854 FBXO2Q9UK22 296 aaPredicted RBP10.65□□□□□ -0.7
SH3D21-206ENST00000508854 VPS37CA5D8V6 355 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 SRRM3A6NNA2 597 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 HOXC11O43248 304 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 HCRTO43612 131 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 ATICP31939 592 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 PTGER3P43115 390 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 TUBP50607 506 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 SIM1P81133 766 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 RPL6Q02878 288 aaKnown RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 SLC14A1Q13336 389 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 TRPC3Q13507 836 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 CCDC142Q17RM4 750 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 ZNF423Q2M1K9 1284 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 WDR72Q3MJ13 1102 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 LY6G5CQ5SRR4 150 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 HECTD3Q5T447 861 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 ARMCX6Q7L4S7 300 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 PIP4P1Q86T03 277 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 ZNF513Q8N8E2 541 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 OR5B17Q8NGF7 314 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 FBXO32Q969P5 355 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 NACA2Q9H009 215 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 FAM124BQ9H5Z6 455 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 HSPBP1Q9NZL4 362 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 MBD1Q9UIS9 605 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 STARD13Q9Y3M8 1113 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 CLIC4Q9Y696 253 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 MORC2Q9Y6X9 1032 aaPredicted RBP10.64□□□□□ -0.71
SH3D21-206ENST00000508854 ATRXP46100 2492 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 PLXND1Q9Y4D7 1925 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 ASPMQ8IZT6 3477 aa10.64□□□□□ -0.71
SH3D21-206ENST00000508854 PI4KAP42356 2102 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 PTPRDP23468 1912 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 FAM221BA6H8Z2 402 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 A8MXQ7 604 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 EIF3DO15371 548 aaKnown RBP eCLIP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 STAU1O95793 577 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 DLATP10515 647 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 HOXB2P14652 356 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 HNRNPLP14866 589 aaKnown RBP eCLIP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 GNSP15586 552 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 TRIM21P19474 475 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 ITPKAP23677 461 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 NTSR1P30989 418 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 KDSRQ06136 332 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 GOLGA8FQ08AF8 430 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 GOLGA8DPQ0D2H9 430 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 E2F5Q15329 346 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 SNRNP35Q16560 246 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 ANO4Q32M45 955 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 SYCP2LQ5T4T6 812 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 EMC10Q5UCC4 262 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 SNX30Q5VWJ9 437 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 LRSAM1Q6UWE0 723 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 CBWD2Q8IUF1 395 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 B3GALNT2Q8NCR0 500 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 SYAP1Q96A49 352 aaPredicted RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 TNIP3Q96KP6 325 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 XPO6Q96QU8 1125 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 MRPL45Q9BRJ2 306 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 GTPBP2Q9BX10 602 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 TNMDQ9H2S6 317 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 CUEDC2Q9H467 287 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 CGNQ9P2M7 1197 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 SUSD2Q9UGT4 822 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 RALYQ9UKM9 306 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 ASCC3Q8N3C0 2202 aaKnown RBP10.63□□□□□ -0.71
SH3D21-206ENST00000508854 PCNX2A6NKB5 2137 aa10.63□□□□□ -0.71
SH3D21-206ENST00000508854 A0A1W2PQD8 194 aa10.62□□□□□ -0.71
SH3D21-206ENST00000508854 ARHGAP33O14559 1287 aa10.62□□□□□ -0.71
SH3D21-206ENST00000508854 COCHO43405 550 aa10.62□□□□□ -0.71
SH3D21-206ENST00000508854 HYAL3O43820 417 aaPredicted RBP10.62□□□□□ -0.71
SH3D21-206ENST00000508854 ADAM23O75077 832 aa10.62□□□□□ -0.71
SH3D21-206ENST00000508854 PHACTR2O75167 634 aa10.62□□□□□ -0.71
SH3D21-206ENST00000508854 TULP3O75386 442 aa10.62□□□□□ -0.71
SH3D21-206ENST00000508854 TOP3BO95985 862 aaKnown RBP10.62□□□□□ -0.71
SH3D21-206ENST00000508854 CST3P01034 146 aaPredicted RBP10.62□□□□□ -0.71
SH3D21-206ENST00000508854 AP3M2P53677 418 aa10.62□□□□□ -0.71
SH3D21-206ENST00000508854 ZNF33AQ06730 810 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms