RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 LACTBL1A8MY62 500 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 PEX1O43933 1283 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 CALB1P05937 261 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 CTSHP09668 335 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 PTDSS1P48651 473 aaKnown RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 CCNHP51946 323 aaPredicted RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 PTK6Q13882 451 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 CA9Q16790 459 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 PRAMEF19Q5SWL8 479 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 FAM219BQ5XKK7 198 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 JADE1Q6IE81 842 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 BZW1Q7L1Q6 419 aaKnown RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 CMC1Q7Z7K0 106 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 MPP5Q8N3R9 675 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 SHKBP1Q8TBC3 707 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 SERAC1Q96JX3 654 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 ROPN1BQ9BZX4 212 aaPredicted RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 ROPN1Q9HAT0 212 aaPredicted RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 HOXC10Q9NYD6 342 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 KCND2Q9NZV8 630 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 PLA2G4CQ9UP65 541 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 CCDC88AQ3V6T2 1871 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 CIB2O75838 187 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 C4BPAP04003 597 aaKnown RBP9.98□□□□□ -0.81
PHF3-208ENST00000506783 ERBB2P04626 1255 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CCDC130P13994 396 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 ATP6V1B1P15313 513 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 ATP4AP20648 1035 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SDC4P31431 198 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SLC1A1P43005 524 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 GBE1Q04446 702 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 POU5F1BQ06416 359 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 MTFR1Q15390 333 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 PLEKHG4Q58EX7 1191 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 MON1BQ7L1V2 547 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 STKLD1Q8NE28 680 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■■■■■ 60.5
PHF3-208ENST00000506783 TRIM11Q96F44 468 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CELF6Q96J87 481 aaKnown RBP9.98□□□□□ -0.81
PHF3-208ENST00000506783 ZNF570Q96NI8 536 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 RNPEPQ9H4A4 650 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 ANKEF1Q9NU02 776 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CES2O00748 559 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SCAMP3O14828 347 aaKnown RBP9.98□□□□□ -0.81
PHF3-208ENST00000506783 UNC5CO95185 931 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 STAG3L1P0CL83 205 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 ERVK-10P10266 1014 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 TSPAN8P19075 237 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 IVDP26440 423 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 TYK2P29597 1187 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 LMNB2Q03252 620 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SLFN12LQ6IEE8 588 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CGB2Q6NT52 195 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CDHR3Q6ZTQ4 885 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CATSPER4Q7RTX7 472 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CROCCP2Q86T23 111 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 BBOF1Q8ND07 529 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SPDYE1Q8NFV5 336 aaPredicted RBP9.98□□□□□ -0.81
PHF3-208ENST00000506783 EXD1Q8NHP7 514 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CPT1BQ92523 772 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 USP13Q92995 863 aaPredicted RBP9.98□□□□□ -0.81
PHF3-208ENST00000506783 EBF4Q9BQW3 602 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CXCL16Q9H2A7 254 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CAB39LQ9H9S4 337 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 TSPAN16Q9UKR8 245 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 UNC80Q8N2C7 3258 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 A0A0B4J269 797 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 TCRBV9S1A1TA0A576 114 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CLDN5O00501 218 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 PPEF2O14830 753 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 DKC1O60832 514 aaKnown RBP eCLIP9.98□□□□□ -0.81
PHF3-208ENST00000506783 KCNA2P16389 499 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 PTPRAP18433 802 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SERPINB5P36952 375 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 NCKAP1LP55160 1127 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 USP4Q13107 963 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 VGLL4Q14135 290 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SEPT6Q14141 434 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 RASA2Q15283 850 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 GOLGA7BQ2TAP0 167 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 FBXO48Q5FWF7 155 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 DNAJC9Q8WXX5 260 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 EDEM1Q92611 657 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 CD101Q93033 1021 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 SRPK1Q96SB4 655 aaKnown RBP9.98□□□□□ -0.81
PHF3-208ENST00000506783 CYTH4Q9UIA0 394 aa9.98□□□□□ -0.81
PHF3-208ENST00000506783 WDR27A2RRH5 827 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 FCHO1O14526 889 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 DCTN3O75935 186 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 ARIH2O95376 493 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 RFX1P22670 979 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 HSD17B4P51659 736 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 GPX6P59796 221 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 PLIN5Q00G26 463 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 GCNT1Q02742 428 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 ITIH4Q14624 930 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 SNX30Q5VWJ9 437 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 CRELD2Q6UXH1 353 aaPredicted RBP9.97□□□□□ -0.81
PHF3-208ENST00000506783 FAM83AQ86UY5 434 aa9.97□□□□□ -0.81
PHF3-208ENST00000506783 SLC9A9Q8IVB4 645 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms