RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 RDXP35241 583 aaKnown RBP13.62□□□□□ -0.23
MATR3-233ENST00000504203 SLC6A3Q01959 620 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 ROR1Q01973 937 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 PDK2Q15119 407 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 MTFR1Q15390 333 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 CDO1Q16878 200 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 BOLA3Q53S33 107 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 ZC3H12AQ5D1E8 599 aaKnown RBP13.62□□□□□ -0.23
MATR3-233ENST00000504203 IQSEC1Q6DN90 963 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 ALKAL1Q6UXT8 129 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 C3orf62Q6ZUJ4 267 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 FUKQ8N0W3 1084 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 FBXO36Q8NEA4 188 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 STK32AQ8WU08 396 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 TEKT4Q8WW24 435 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 MAK16Q9BXY0 300 aaKnown RBP13.62□□□□□ -0.23
MATR3-233ENST00000504203 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 USP29Q9HBJ7 922 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 TUBGCP4Q9UGJ1 667 aa13.62□□□□□ -0.23
MATR3-233ENST00000504203 A0A1W2PPM1 405 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
MATR3-233ENST00000504203 PHBP35232 272 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 TMEM62Q0P6H9 643 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 ZKSCAN8Q15776 578 aaPredicted RBP13.61□□□□□ -0.23
MATR3-233ENST00000504203 GALNTL6Q49A17 601 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 ADGRD1Q6QNK2 874 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 RGS9BPQ6ZS82 235 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 ZC3H18Q86VM9 953 aaKnown RBP13.61□□□□□ -0.23
MATR3-233ENST00000504203 VSIG1Q86XK7 387 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 PDIK1LQ8N165 341 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 PQLC3Q8N755 202 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 PLD5Q8N7P1 536 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
MATR3-233ENST00000504203 SMC6Q96SB8 1091 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 GCOM2Q9BZD3 368 aaPredicted RBP13.61□□□□□ -0.23
MATR3-233ENST00000504203 SSU72Q9NP77 194 aaKnown RBP13.61□□□□□ -0.23
MATR3-233ENST00000504203 FAM49BQ9NUQ9 324 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 HAUS2Q9NVX0 235 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 ARL2BPQ9Y2Y0 163 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 SCN4AP35499 1836 aa13.61□□□□□ -0.23
MATR3-233ENST00000504203 GLTPD2A6NH11 291 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 BASP1P80723 227 aaKnown RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 ATP11AP98196 1134 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 CDC42EP1Q00587 391 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 RNASELQ05823 741 aaKnown RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 KCNJ11Q14654 390 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 EFTUD2Q15029 972 aaKnown RBP eCLIP13.6□□□□□ -0.233e-7■■■■■ 28.6
MATR3-233ENST00000504203 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 DARS2Q6PI48 645 aaKnown RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 CATSPER4Q7RTX7 472 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 APBB1IPQ7Z5R6 666 aaPredicted RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 UNC93AQ86WB7 457 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 MAP7D3Q8IWC1 876 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 C4orf33Q8N1A6 199 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 TAB3Q8N5C8 712 aaPredicted RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 NPLOC4Q8TAT6 608 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 FBF1Q8TES7 1133 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 MZB1Q8WU39 189 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 FAM172AQ8WUF8 416 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 C18orf25Q96B23 403 aaPredicted RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 GRAMD1AQ96CP6 724 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 RTP4Q96DX8 246 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 TBCBQ99426 244 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 FAM49AQ9H0Q0 323 aaPredicted RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 KLC4Q9NSK0 619 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 GRID1Q9ULK0 1009 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 HES2Q9Y543 173 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 MBLAC1A4D2B0 266 aaPredicted RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 SDC4P31431 198 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 RPA3P35244 121 aaPredicted RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 SPARCL1Q14515 664 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
MATR3-233ENST00000504203 SOWAHAQ2M3V2 549 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 KLHL38Q2WGJ6 581 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 BBS9Q3SYG4 887 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 SLC9A4Q6AI14 798 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 NOTUMQ6P988 496 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 SESTD1Q86VW0 696 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 SCUBE3Q8IX30 993 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 BEST2Q8NFU1 509 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 FAF2Q96CS3 445 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 PAFAH2Q99487 392 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 PLCD4Q9BRC7 762 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 SNRNP25Q9BV90 132 aaKnown RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 ZNF408Q9H9D4 720 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 NGRNQ9NPE2 291 aaKnown RBP13.6□□□□□ -0.23
MATR3-233ENST00000504203 GPATCH2LQ9NWQ4 482 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 GINS2Q9Y248 185 aa13.6□□□□□ -0.23
MATR3-233ENST00000504203 A6NJR5 290 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 MDM4O15151 490 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 UBOX5O94941 541 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 F2P00734 622 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 SMIM10L2AP0DMW4 78 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 SMIM10L2BP0DMW5 78 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 DARSP14868 501 aaKnown RBP13.59□□□□□ -0.23
MATR3-233ENST00000504203 TGM2P21980 687 aa13.59□□□□□ -0.23
MATR3-233ENST00000504203 YARSP54577 528 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms