RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CYP4A22Q5TCH4 519 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 CDCP2Q5VXM1 449 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 EGFLAMQ63HQ2 1017 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 TWF2Q6IBS0 349 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 CLEC14AQ86T13 490 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 CDH24Q86UP0 819 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 PHC2Q8IXK0 858 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 TRIM22Q8IYM9 498 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 SRBD1Q8N5C6 995 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 ALLCQ8N6M5 410 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 IL17RCQ8NAC3 791 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 GLIS1Q8NBF1 620 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 LRRN4CLQ8ND94 238 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 RIN3Q8TB24 985 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 RABGGTAQ92696 567 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 RRP36Q96EU6 259 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 INTS4Q96HW7 963 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 SLC46A1Q96NT5 459 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 IPO9Q96P70 1041 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 C2orf49Q9BVC5 232 aaPredicted RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 SPZ1Q9BXG8 430 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 SLC26A6Q9BXS9 759 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 LRRC3Q9BY71 257 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 GPR88Q9GZN0 384 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 VAT1LQ9HCJ6 419 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 GPAMQ9HCL2 828 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 DLL4Q9NR61 685 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 LATS2Q9NRM7 1088 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 GKN1Q9NS71 199 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 MTRRQ9UBK8 725 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 CACNG4Q9UBN1 327 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 ADAMTS1Q9UHI8 967 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 SMC3Q9UQE7 1217 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 KIF3AQ9Y496 699 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 NFE2L3Q9Y4A8 694 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 MYO18AQ92614 2054 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 SF3B1O75533 1304 aaKnown RBP eCLIP5.68□□□□□ -1.5
FXN-205ENST00000498653 MGAM2Q2M2H8 2515 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 FAM221AA4D161 298 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 EML1O00423 815 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 KCNK3O14649 394 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 BCAT2O15382 392 aaPredicted RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 JAK2O60674 1132 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 DEXIO95424 95 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 CTDNEP1O95476 244 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 GJB2P29033 226 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 RAB27AP51159 221 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 KRTAP10-9P60411 292 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 TRAF1Q13077 416 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 NTRK3Q16288 839 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 EIF2S3LQ2VIR3 472 aaKnown RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 FIGNL1Q6PIW4 674 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 GATAD2AQ86YP4 633 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 SFTPA1Q8IWL2 248 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 ADGRF4Q8IZF3 695 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 ZNF295-AS1Q8N0V1 137 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 NAGSQ8N159 534 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 FAM184AQ8NB25 1140 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 TXNDC5Q8NBS9 432 aaKnown RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 NSUN7Q8NE18 718 aaKnown RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 ZDHHC1Q8WTX9 485 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 PIBF1Q8WXW3 757 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 WASF1Q92558 559 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 IGSF8Q969P0 613 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 RNF26Q9BY78 433 aaPredicted RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 NUCKS1Q9H1E3 243 aaKnown RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 RIOX1Q9H6W3 641 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 JMJD4Q9H9V9 463 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 MIOSQ9NXC5 875 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 RTEL1Q9NZ71 1219 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 ORC3Q9UBD5 711 aaPredicted RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 TJP2Q9UDY2 1190 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 SEC63Q9UGP8 760 aaKnown RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 CYP8B1Q9UNU6 501 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 SATB2Q9UPW6 733 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 RPH3AQ9Y2J0 694 aaPredicted RBP5.67□□□□□ -1.5
FXN-205ENST00000498653 INSL5Q9Y5Q6 135 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 CDY1Q9Y6F8 540 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 STK36Q9NRP7 1315 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 CNTNAP2Q9UHC6 1331 aa5.67□□□□□ -1.5
FXN-205ENST00000498653 PNMA6FA0A0J9YX94 578 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 hCG_1642624A0A1W2PR95 340 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 HEATR9A2RTY3 570 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 CDC14CA4D256 554 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 H3BM21 787 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 ZBTB5O15062 677 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 CYTH3O43739 400 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 STAM2O75886 525 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 SEC24AO95486 1093 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 KLF8O95600 359 aaPredicted RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 XBP1P17861 261 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 SCNN1GP51170 649 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 GPC3P51654 580 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 MRPL49Q13405 166 aaKnown RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 TRIM29Q14134 588 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 TGIF1Q15583 401 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 PFKFB3Q16875 520 aaPredicted RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 SLC35G1Q2M3R5 365 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms