RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 RINLQ6ZS11 566 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 TAB3Q8N5C8 712 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 BANPQ8N9N5 519 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 PYROXD1Q8WU10 500 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 BRI3BPQ8WY22 251 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 NSL1Q96IY1 281 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 GPR20Q99678 358 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 XYLT2Q9H1B5 865 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 PCDH9Q9HC56 1237 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 ASB3Q9Y575 518 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 A0A0G2JMZ2 1700 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 INO80B-WBP1J3KQ70 363 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 GYG2O15488 501 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 ITGAVP06756 1048 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 TGFB3P10600 412 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 GNAT1P11488 350 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 SERPINB3P29508 390 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 TFDP3Q5H9I0 405 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 LRRC38Q5VT99 294 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 SLC30A9Q6PML9 568 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 ADGRD1Q6QNK2 874 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 C3orf62Q6ZUJ4 267 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 TMEM192Q8IY95 271 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 SCG3Q8WXD2 468 aaKnown RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 NKD2Q969F2 451 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 DHRS4Q9BTZ2 278 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 TRIM55Q9BYV6 548 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 INO80BQ9C086 356 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 ZWILCHQ9H900 591 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 KCNK13Q9HB14 408 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 TXNRD2Q9NNW7 524 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 SAE1Q9UBE0 346 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 C2orf71A6NGG8 1288 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 YY1P25490 414 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 CDKN2BP42772 138 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 ARFIP2P53365 341 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 DYNLT1P63172 113 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 PIGHQ14442 188 aaPredicted RBP17.1■□□□□ 0.33
COL6A1-206ENST00000498614 PTPN20Q4JDL3 420 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 IRGCQ6NXR0 463 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 MPZL3Q6UWV2 235 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 FASTKD5Q7L8L6 764 aaKnown RBP17.1■□□□□ 0.33
COL6A1-206ENST00000498614 DCAKDQ8WVC6 231 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 WDR60Q8WVS4 1066 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 SKA1Q96BD8 255 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 PTPN18Q99952 460 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 TSSK1BQ9BXA7 367 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 ZNF518BQ9C0D4 1074 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 CYTH4Q9UIA0 394 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
COL6A1-206ENST00000498614 PCDHGC3Q9UN70 934 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 CAPN9O14815 690 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 TNNC2P02585 160 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 EIF4BP23588 611 aaKnown RBP17.1■□□□□ 0.33
COL6A1-206ENST00000498614 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
COL6A1-206ENST00000498614 GDF10P55107 478 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 CDH8P55286 799 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 RCN2Q14257 317 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 Q3C1V9 767 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 KCNT1Q5JUK3 1230 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 ATF7IP2Q5U623 682 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 ATP11CQ8NB49 1132 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 JOSD2Q8TAC2 188 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 DTX3LQ8TDB6 740 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 CPT1BQ92523 772 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 COPS5Q92905 334 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 ANKRD36BP1Q96IX9 119 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 TMEM120AQ9BXJ8 343 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 VPS11Q9H270 941 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 LRCH1Q9Y2L9 728 aa17.1■□□□□ 0.33
COL6A1-206ENST00000498614 TM9SF1O15321 606 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 TBX10O75333 385 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PSMG1O95456 288 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 CXCL8P10145 99 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PSMA2P25787 234 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PHBP35232 272 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 CLCN3P51790 818 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 SURF1Q15526 300 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 RNF220Q5VTB9 566 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 OR52E8Q6IFG1 317 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PHC3Q8NDX5 983 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 FBXO36Q8NEA4 188 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 SLC35B2Q8TB61 432 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 ACSS3Q9H6R3 686 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PAPOLBQ9NRJ5 636 aaKnown RBP17.09■□□□□ 0.33
COL6A1-206ENST00000498614 DDX56Q9NY93 547 aaKnown RBP17.09■□□□□ 0.33
COL6A1-206ENST00000498614 FETUBQ9UGM5 382 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 ANK1P16157 1881 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 TCRBV7S3A2A0A539 114 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PDHXO00330 501 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PROZP22891 400 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms