RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 TBC1D17Q9HA65 648 aa12.38□□□□□ -0.43
MRPL55-234ENST00000497758 LRRC4Q9HBW1 653 aa12.38□□□□□ -0.43
MRPL55-234ENST00000497758 ARHGAP26Q9UNA1 814 aa12.38□□□□□ -0.43
MRPL55-234ENST00000497758 SCML2Q9UQR0 700 aa12.38□□□□□ -0.43
MRPL55-234ENST00000497758 GREB1Q4ZG55 1949 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 BECN2A8MW95 431 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 THAP12O43422 761 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 MED7O43513 233 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 OAS1P00973 400 aaKnown RBP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 MBL2P11226 248 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 ZNF165P49910 485 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 TUBP50607 506 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 PDE4CQ08493 712 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 RAPGEF1Q13905 1077 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 MTF1Q14872 753 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 CNGA2Q16280 664 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 TADA2BQ86TJ2 420 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 DDX42Q86XP3 938 aaKnown RBP eCLIP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 SIX6OS1Q8N1H7 587 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 SH3RF2Q8TEC5 729 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 ZFYVE19Q96K21 471 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 LRRC3BQ96PB8 259 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 SIX2Q9NPC8 291 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 TRPV5Q9NQA5 729 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 HEBP1Q9NRV9 189 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 SMPD4Q9NXE4 827 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 NAGPAQ9UK23 515 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 DNAJC12Q9UKB3 198 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 CNTN6Q9UQ52 1028 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 HCN4Q9Y3Q4 1203 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 CPQQ9Y646 472 aa12.37□□□□□ -0.43
MRPL55-234ENST00000497758 NUP210Q8TEM1 1887 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-234ENST00000497758 LGALS16A8MUM7 142 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 COCHO43405 550 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 TLR5O60602 858 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 CALCAP01258 141 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 RALAP11233 206 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 GNA15P30679 374 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 PLA2G4AP47712 749 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 PSEN1P49768 467 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 CLCN5P51795 746 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 TKTL1P51854 596 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 COPB1P53618 953 aaKnown RBP12.36□□□□□ -0.43
MRPL55-234ENST00000497758 TPM4P67936 248 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 SLC7A9P82251 487 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 NCAPHQ15003 741 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 PDGFRLQ15198 375 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 ZNF77Q15935 545 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 KLHDC7AQ5VTJ3 777 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 SNX30Q5VWJ9 437 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 ARHGAP18Q8N392 663 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 SHC3Q92529 594 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
MRPL55-234ENST00000497758 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
MRPL55-234ENST00000497758 RNF38Q9H0F5 515 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 CCSER2Q9H7U1 834 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 GKN1Q9NS71 199 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 LIMA1Q9UHB6 759 aaKnown RBP12.36□□□□□ -0.43
MRPL55-234ENST00000497758 MRPS17Q9Y2R5 130 aaKnown RBP12.36□□□□□ -0.43
MRPL55-234ENST00000497758 PIAS3Q9Y6X2 628 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 OBSL1O75147 1896 aa12.36□□□□□ -0.43
MRPL55-234ENST00000497758 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 LEFTY2O00292 366 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 TULP2O00295 520 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ARNTLO00327 626 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 MAN2B1O00754 1011 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 OLFM2O95897 454 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ZBED1O96006 694 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 GLULP15104 373 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 UCHL3P15374 230 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ZNF18P17022 549 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 IFNAR2P48551 515 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 STARD6P59095 220 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 BPIFB4P59827 614 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 UBXN1Q04323 297 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 PTK2Q05397 1052 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 GOLGA8FQ08AF8 430 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 GOLGA8DPQ0D2H9 430 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 USP4Q13107 963 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 UBXN2BQ14CS0 331 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ITPRIPL2Q3MIP1 535 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 RAB41Q5JT25 222 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 C10orf120Q5SQS8 335 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 IER5LQ5T953 404 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 SMYD5Q6GMV2 418 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ZNF852Q6ZMS4 543 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 DHX40Q8IX18 779 aaKnown RBP12.35□□□□□ -0.43
MRPL55-234ENST00000497758 TTC8Q8TAM2 541 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 CDK5RAP1Q96SZ6 601 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms