RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 GALNT15Q8N3T1 639 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 ZGPATQ8N5A5 531 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CCDC33Q8N5R6 958 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 OR7D4Q8NG98 312 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 IPCEF1Q8WWN9 437 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 RILPL2Q969X0 211 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 SH3KBP1Q96B97 665 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 RRP36Q96EU6 259 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CEP95Q96GE4 821 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 BORCS6Q96GS4 357 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 LRRC37BQ96QE4 947 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 TREX2Q9BQ50 279 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 PDCD2LQ9BRP1 358 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 ZMAT3Q9HA38 289 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 BCO1Q9HAY6 547 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 PLSCR4Q9NRQ2 329 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 ATP8A2Q9NTI2 1148 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 OLA1Q9NTK5 396 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 GJB4Q9NTQ9 266 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 NSMCE4AQ9NXX6 385 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 DACT1Q9NYF0 836 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 TFCP2L1Q9NZI6 479 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 HECAQ9UBI9 543 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 PCDHB1Q9Y5F3 818 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 NR2E3Q9Y5X4 410 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 PIK3C2BO00750 1634 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 BRD4O60885 1362 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CDH23Q9H251 3354 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CCDC144AA2RUR9 1427 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 NUP153P49790 1475 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 A0A087X0M5 115 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 A0A1B0GX30 115 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 UBE2QL1A1L167 161 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 GTPBP10A4D1E9 387 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 GOLGA6L3A6NEY3 463 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 TRIM38O00635 465 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 APOL1O14791 398 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 HOXC11O43248 304 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 AKR1B10O60218 316 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 DOK2O60496 412 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 CDC14BO60729 498 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 PHF2O75151 1096 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 GASTP01350 101 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 GYPEP15421 78 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 ALOX15P16050 662 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 PCSK1P29120 753 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 ADSLP30566 484 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 SERPINF1P36955 418 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 PIK3CAP42336 1068 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 DRG2P55039 364 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 SNX16P57768 344 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 RAB1AP62820 205 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 FOXO1Q12778 655 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 TARDBPQ13148 414 aaKnown RBP eCLIP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 PPP2R5CQ13362 524 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 MRPL49Q13405 166 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 IL10RAQ13651 578 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 DAG1Q14118 895 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 KRT32Q14532 448 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 ZNF568Q3ZCX4 644 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 DNAJC21Q5F1R6 531 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 FBXO47Q5MNV8 452 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 MFSD14BQ5SR56 506 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 PRAMEF14Q5SWL7 426 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 UBXN11Q5T124 520 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 NUGGCQ68CJ6 796 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 CASC1Q6TDU7 716 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 ZNF572Q7Z3I7 529 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 MOGAT3Q86VF5 341 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 SESTD1Q86VW0 696 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 APPL2Q8NEU8 664 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 REPS2Q8NFH8 660 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 HERVK_113Q902F9 699 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 HTRA1Q92743 480 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 SNX21Q969T3 373 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 RADILQ96JH8 1075 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 MAELQ96JY0 434 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 ADI1Q9BV57 179 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 CNPPD1Q9BV87 410 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 KATNAL1Q9BW62 490 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 STK33Q9BYT3 514 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 SLC13A4Q9UKG4 626 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 CARMIL1Q5VZK9 1371 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 COL18A1P39060 1754 aa4.12□□□□□ -1.75
EXOSC3-208ENST00000496910 A0A088AWK7 358 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 A0A1W2PPC4 97 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 PABPN1LA6NDY0 278 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 PGPEP1LA6NFU8 196 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM171A2A8MVW0 826 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 F5H0A9 414 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 SYT5O00445 386 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 NRP1O14786 923 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ZBED4O75132 1171 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 SOAT2O75908 522 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 GYS1P13807 737 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 XBP1P17861 261 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 FPR1P21462 350 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms