RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 CCSER2Q9H7U1 834 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 IL37Q9NZH6 218 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 CFAP97Q9P2B7 532 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 CHORDC1Q9UHD1 332 aaPredicted RBP15.99■□□□□ 0.15
NEK4-206ENST00000496822 FAM92AA1XBS5 289 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 CD58P19256 250 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 TGM1P22735 817 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 HOXA6P31267 233 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 OPRD1P41143 372 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 PRCPP42785 496 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 SIM2Q14190 667 aaPredicted RBP15.98■□□□□ 0.15
NEK4-206ENST00000496822 EDRF1Q3B7T1 1238 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 WDR5BQ86VZ2 330 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 RPLP0P6Q8NHW5 317 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 OVCA2Q8WZ82 227 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 SEMA4DQ92854 862 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 JAKMIP2Q96AA8 810 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 IMPG2Q9BZV3 1241 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 CSNK1G1Q9HCP0 422 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 RAB23Q9ULC3 237 aa15.98■□□□□ 0.15
NEK4-206ENST00000496822 CILPO75339 1184 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 ZDHHC11BP0C7U3 371 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 FAM200BP0CF97 657 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 PMS1P54277 932 aaKnown RBP15.97■□□□□ 0.15
NEK4-206ENST00000496822 MCCD1P59942 119 aaPredicted RBP15.97■□□□□ 0.15
NEK4-206ENST00000496822 ENPEPQ07075 957 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 MESP2Q0VG99 397 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 LAIR1Q6GTX8 287 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 SFTPA1Q8IWL2 248 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 SECISBP2LQ93073 1101 aaKnown RBP15.97■□□□□ 0.15
NEK4-206ENST00000496822 WBP2Q969T9 261 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 HHIPQ96QV1 700 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 GMEB2Q9UKD1 530 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 DNAH14Q0VDD8 3507 aa15.97■□□□□ 0.15
NEK4-206ENST00000496822 HHLA1C9JL84 531 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 MXI1P50539 228 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 NUCB2P80303 420 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 SPEM2Q0P670 501 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 NR1H3Q13133 447 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 DHCR24Q15392 516 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 FBXO43Q4G163 708 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 HECTD3Q5T447 861 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 ZNF658Q5TYW1 1059 aaPredicted RBP15.96■□□□□ 0.15
NEK4-206ENST00000496822 SNX30Q5VWJ9 437 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 KRT39Q6A163 491 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 CLEC20AQ6ZU45 233 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 C12orf40Q86WS4 652 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 ADGRG2Q8IZP9 1017 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 SPATA20Q8TB22 786 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 CCDC34Q96HJ3 373 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 HNRNPABQ99729 332 aaKnown RBP15.96■□□□□ 0.15
NEK4-206ENST00000496822 ARID3AQ99856 593 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 NT5C1AQ9BXI3 368 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 CYP3A43Q9HB55 503 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 RMND1Q9NWS8 449 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 USP18Q9UMW8 372 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 SLC8A2Q9UPR5 921 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 PCDHA5Q9Y5H7 936 aa15.96■□□□□ 0.15
NEK4-206ENST00000496822 KIAA1549LQ6ZVL6 1849 aa15.96■□□□□ 0.14
NEK4-206ENST00000496822 MYO16Q9Y6X6 1858 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CEP250Q9BV73 2442 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 TRIM49BA6NDI0 452 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 GOLGA6L4A6NEF3 574 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CETN3O15182 167 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CYP26A1O43174 497 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 ATG13O75143 517 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 EPB41P11171 864 aaKnown RBP15.95■□□□□ 0.14
NEK4-206ENST00000496822 GTF2H1P32780 548 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CNR2P34972 360 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 TUBP50607 506 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 SEC13P55735 322 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CBWD6Q4V339 395 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 ZNF394Q53GI3 561 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CBWD3Q5JTY5 395 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CBWD5Q5RIA9 395 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 RHBDF2Q6PJF5 856 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.95■□□□□ 0.14
NEK4-206ENST00000496822 DDX42Q86XP3 938 aaKnown RBP eCLIP15.95■□□□□ 0.14
NEK4-206ENST00000496822 ZC3H3Q8IXZ2 948 aaKnown RBP15.95■□□□□ 0.14
NEK4-206ENST00000496822 KIAA1958Q8N8K9 716 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 EXOC4Q96A65 974 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 CYFIP2Q96F07 1278 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 GSDMAQ96QA5 445 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 COMMD8Q9NX08 183 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 OSER1Q9NX31 292 aa15.95■□□□□ 0.14
NEK4-206ENST00000496822 K7EQS6 105 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 SLC9A3R1O14745 358 aaPredicted RBP15.94■□□□□ 0.14
NEK4-206ENST00000496822 TLR5O60602 858 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 TBX18O95935 607 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 RETP07949 1114 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 IRF1P10914 325 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 CHRM1P11229 460 aaPredicted RBP15.94■□□□□ 0.14
NEK4-206ENST00000496822 SLC6A11P48066 632 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 DMC1Q14565 340 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 RSPO4Q2I0M5 234 aaPredicted RBP15.94■□□□□ 0.14
NEK4-206ENST00000496822 COBLL1Q53SF7 1204 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 DCAF17Q5H9S7 520 aaPredicted RBP15.94■□□□□ 0.14
NEK4-206ENST00000496822 PPP1R26Q5T8A7 1209 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms