RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 SIX2Q9NPC8 291 aa23.97■■□□□ 1.43
CHRD-217ENST00000496527 ARHGAP26Q9UNA1 814 aa23.97■■□□□ 1.43
CHRD-217ENST00000496527 ANAPC1Q9H1A4 1944 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 XPO1O14980 1071 aaKnown RBP23.96■■□□□ 1.43
CHRD-217ENST00000496527 ZDHHC11BP0C7U3 371 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 USP8P40818 1118 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 PDE4CQ08493 712 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 SKOR2Q2VWA4 1001 aaPredicted RBP23.96■■□□□ 1.43
CHRD-217ENST00000496527 UBA3Q8TBC4 463 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 ZFYVE19Q96K21 471 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 BPIFA3Q9BQP9 254 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 RNF38Q9H0F5 515 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 TBC1D17Q9HA65 648 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 HEBP1Q9NRV9 189 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 DNAJC12Q9UKB3 198 aa23.96■■□□□ 1.43
CHRD-217ENST00000496527 SYCE3A1L190 88 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 CYP26A1O43174 497 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 SETSIPP0DME0 302 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 TUBP50607 506 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 STARD6P59095 220 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 SLC7A9P82251 487 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 KCNMA1Q12791 1236 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 NCAPHQ15003 741 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 ASTLQ6HA08 431 aaPredicted RBP23.95■■□□□ 1.42
CHRD-217ENST00000496527 SH3RF2Q8TEC5 729 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.95■■□□□ 1.42
CHRD-217ENST00000496527 USP3Q9Y6I4 520 aa23.95■■□□□ 1.42
CHRD-217ENST00000496527 SMTNL1A8MU46 457 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 ARNTLO00327 626 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 OLFM2O95897 454 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 CALCAP01258 141 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 MBL2P11226 248 aaPredicted RBP23.94■■□□□ 1.42
CHRD-217ENST00000496527 CLCN5P51795 746 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 MTF1Q14872 753 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 ZNF77Q15935 545 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 FKBP15Q5T1M5 1219 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 TPRG1Q6ZUI0 275 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 CCDC186Q7Z3E2 898 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 SHC3Q92529 594 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 ZSWIM1Q9BR11 485 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 NACA2Q9H009 215 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 CCSER2Q9H7U1 834 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 LRRC4Q9HBW1 653 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 GKN1Q9NS71 199 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 LIMA1Q9UHB6 759 aaKnown RBP23.94■■□□□ 1.42
CHRD-217ENST00000496527 PATJQ8NI35 1801 aa23.94■■□□□ 1.42
CHRD-217ENST00000496527 M0QYV0 167 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 TULP2O00295 520 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 COCHO43405 550 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 MED7O43513 233 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 TCF3P15923 654 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 ZNF18P17022 549 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 AVPR2P30518 371 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 PLA2G4AP47712 749 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 ZNF165P49910 485 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 TKTL1P51854 596 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 COPB1P53618 953 aaKnown RBP23.93■■□□□ 1.42
CHRD-217ENST00000496527 VCPP55072 806 aaKnown RBP23.93■■□□□ 1.42
CHRD-217ENST00000496527 USP4Q13107 963 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 PKDCCQ504Y2 493 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 RAB41Q5JT25 222 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 CWF19L1Q69YN2 538 aaKnown RBP23.93■■□□□ 1.42
CHRD-217ENST00000496527 SMYD5Q6GMV2 418 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 FUCA2Q9BTY2 467 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 LSM14BQ9BX40 385 aaKnown RBP23.93■■□□□ 1.42
CHRD-217ENST00000496527 SMPD4Q9NXE4 827 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 CPQQ9Y646 472 aa23.93■■□□□ 1.42
CHRD-217ENST00000496527 A0A1W2PQH9 124 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 BECN2A8MW95 431 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 LEFTY2O00292 366 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 TLR5O60602 858 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 GNA15P30679 374 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 PGFP49763 221 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 PSEN1P49768 467 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 KPNA1P52294 538 aaPredicted RBP23.92■■□□□ 1.42
CHRD-217ENST00000496527 KLHDC7AQ5VTJ3 777 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 RIN3Q8TB24 985 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 SECISBP2LQ93073 1101 aaKnown RBP23.92■■□□□ 1.42
CHRD-217ENST00000496527 FAM83CQ9BQN1 747 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 NAGPAQ9UK23 515 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 AJAP1Q9UKB5 411 aaPredicted RBP23.92■■□□□ 1.42
CHRD-217ENST00000496527 HCN4Q9Y3Q4 1203 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 PIAS3Q9Y6X2 628 aa23.92■■□□□ 1.42
CHRD-217ENST00000496527 KANSL1LA0AUZ9 987 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 MAN2B1O00754 1011 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 THAP12O43422 761 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 GLULP15104 373 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 AOC1P19801 751 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 COL9A1P20849 921 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 TNK2Q07912 1038 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 RAPGEF1Q13905 1077 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 PDGFRLQ15198 375 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 DPY19L2P1Q6NXN4 242 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 ZNF852Q6ZMS4 543 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 DDX42Q86XP3 938 aaKnown RBP eCLIP23.91■■□□□ 1.42
CHRD-217ENST00000496527 DHX40Q8IX18 779 aaKnown RBP23.91■■□□□ 1.42
CHRD-217ENST00000496527 ARHGAP18Q8N392 663 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 SLC35F5Q8WV83 523 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 ZNF606Q8WXB4 792 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 KCTD13Q8WZ19 329 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms