RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ZFRQ96KR1 1074 aaKnown RBP15.14■□□□□ 0.01
VTI1A-209ENST00000496445 MMRN2Q9H8L6 949 aa15.14■□□□□ 0.01
VTI1A-209ENST00000496445 PARD6AQ9NPB6 346 aa15.14■□□□□ 0.01
VTI1A-209ENST00000496445 FAM49BQ9NUQ9 324 aa15.14■□□□□ 0.01
VTI1A-209ENST00000496445 GMIPQ9P107 970 aa15.14■□□□□ 0.01
VTI1A-209ENST00000496445 COCHO43405 550 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 NFATC1O95644 943 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 ZDHHC11BP0C7U3 371 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 OPRD1P41143 372 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 PGFP49763 221 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 EDRF1Q3B7T1 1238 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 SNX30Q5VWJ9 437 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 RALGAPA1Q6GYQ0 2036 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 PRR23BQ6ZRT6 265 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 GPRIN1Q7Z2K8 1008 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 WDR5BQ86VZ2 330 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 PDZD8Q8NEN9 1154 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 WHAMMQ8TF30 809 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
VTI1A-209ENST00000496445 EEF2KMTQ96G04 330 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 CCSER2Q9H7U1 834 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 TMEM8AQ9HCN3 771 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 CSNK1G1Q9HCP0 422 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 CFAP97Q9P2B7 532 aa15.13■□□□□ 0.01
VTI1A-209ENST00000496445 ANTXRLA6NF34 631 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 CILPO75339 1184 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 MBL2P11226 248 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-209ENST00000496445 KRT13P13646 458 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 RPL13P26373 211 aaKnown RBP15.12■□□□□ 0.01
VTI1A-209ENST00000496445 ADORA2BP29275 332 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 PXNP49023 591 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-209ENST00000496445 MAP3K7CLP57077 242 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 SIM2Q14190 667 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-209ENST00000496445 BECN1Q14457 450 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 LAIR1Q6GTX8 287 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 CLEC20AQ6ZU45 233 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 KIAA1958Q8N8K9 716 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 RPLP0P6Q8NHW5 317 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 SEMA4DQ92854 862 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 IMPG2Q9BZV3 1241 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 CHORDC1Q9UHD1 332 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-209ENST00000496445 GMEB2Q9UKD1 530 aa15.12■□□□□ 0.01
VTI1A-209ENST00000496445 HHLA1C9JL84 531 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 ATG13O75143 517 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 FAM200BP0CF97 657 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 CD58P19256 250 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 CNR2P34972 360 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 PRCPP42785 496 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 TUBP50607 506 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 MESP2Q0VG99 397 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 FBXO43Q4G163 708 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 COBLL1Q53SF7 1204 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 HECTD3Q5T447 861 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 KRT39Q6A163 491 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 C12orf40Q86WS4 652 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 ZC3H3Q8IXZ2 948 aaKnown RBP15.11■□□□□ 0.01
VTI1A-209ENST00000496445 SPATA20Q8TB22 786 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 SECISBP2LQ93073 1101 aaKnown RBP15.11■□□□□ 0.01
VTI1A-209ENST00000496445 WBP2Q969T9 261 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 HHIPQ96QV1 700 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 NT5C1AQ9BXI3 368 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 CYP3A43Q9HB55 503 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 COMMD8Q9NX08 183 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 RAB23Q9ULC3 237 aa15.11■□□□□ 0.01
VTI1A-209ENST00000496445 K7EQS6 105 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 CYP26A1O43174 497 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 CHRM1P11229 460 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-209ENST00000496445 GTF2H1P32780 548 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 MXI1P50539 228 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 PMS1P54277 932 aaKnown RBP15.1■□□□□ 0.01
VTI1A-209ENST00000496445 NUCB2P80303 420 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 NR1H3Q13133 447 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 DHCR24Q15392 516 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-209ENST00000496445 RHBDF2Q6PJF5 856 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 DDX42Q86XP3 938 aaKnown RBP eCLIP15.1■□□□□ 0.01
VTI1A-209ENST00000496445 SFTPA1Q8IWL2 248 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 ADGRG2Q8IZP9 1017 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 EXOC4Q96A65 974 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 JAKMIP2Q96AA8 810 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 HNRNPABQ99729 332 aaKnown RBP15.1■□□□□ 0.01
VTI1A-209ENST00000496445 RMND1Q9NWS8 449 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 DLL3Q9NYJ7 618 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 USP18Q9UMW8 372 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 SLC8A2Q9UPR5 921 aa15.1■□□□□ 0.01
VTI1A-209ENST00000496445 CCDC163A0A0D9SF12 145 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 TRIM49BA6NDI0 452 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 SLC9A3R1O14745 358 aaPredicted RBP15.09■□□□□ 0.01
VTI1A-209ENST00000496445 CETN3O15182 167 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 SLC16A3O15427 465 aaKnown RBP15.09■□□□□ 0.01
VTI1A-209ENST00000496445 RETP07949 1114 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 EPB41P11171 864 aaKnown RBP15.09■□□□□ 0.01
VTI1A-209ENST00000496445 SPEM2Q0P670 501 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 RSPO4Q2I0M5 234 aaPredicted RBP15.09■□□□□ 0.01
VTI1A-209ENST00000496445 CBWD6Q4V339 395 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 CBWD3Q5JTY5 395 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 CBWD5Q5RIA9 395 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 SYT13Q7L8C5 426 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms