RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 CTSAP10619 480 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 HAPLN1P10915 354 aaPredicted RBP11.56□□□□□ -0.56
PKP4-215ENST00000494945 PDGFRAP16234 1089 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 SDC4P31431 198 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 OR1D2P34982 312 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 FLT3P36888 993 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 BMPR1AP36894 532 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 MAGEA10P43363 369 aaPredicted RBP11.56□□□□□ -0.56
PKP4-215ENST00000494945 PTPN9P43378 593 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 PEX5P50542 639 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 DNA2P51530 1060 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 ARPP19P56211 112 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 RNASE9P60153 205 aaKnown RBP11.56□□□□□ -0.56
PKP4-215ENST00000494945 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
PKP4-215ENST00000494945 YWHAZP63104 245 aaKnown RBP11.56□□□□□ -0.56
PKP4-215ENST00000494945 TAF5Q15542 800 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 CLUL1Q15846 466 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 PTPROQ16827 1216 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 LRRC38Q5VT99 294 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 PM20D1Q6GTS8 502 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
PKP4-215ENST00000494945 RNF19BQ6ZMZ0 732 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 GPRIN1Q7Z2K8 1008 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 SCN4BQ8IWT1 228 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 RHOT1Q8IXI2 618 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 CEP112Q8N8E3 955 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 MNS1Q8NEH6 495 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 ZNF461Q8TAF7 563 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 CLEC4CQ8WTT0 213 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 SPATA17Q96L03 361 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 CLSTN3Q9BQT9 956 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 ZBP1Q9H171 429 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 COMMD8Q9NX08 183 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.56□□□□□ -0.56
PKP4-215ENST00000494945 AFF4Q9UHB7 1163 aaKnown RBP11.56□□□□□ -0.56
PKP4-215ENST00000494945 MAFFQ9ULX9 164 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 USTQ9Y2C2 406 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 USP3Q9Y6I4 520 aa11.56□□□□□ -0.56
PKP4-215ENST00000494945 LCHNA4D1U4 455 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 LINC01553A4QN01 128 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 C2CD2LO14523 706 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 ZNF185O15231 689 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 ADAM12O43184 909 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 LILRB3O75022 631 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 LRCH4O75427 683 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 GRAP2O75791 330 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 ABLIM3O94929 683 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RTN3O95197 1032 aaPredicted RBP11.55□□□□□ -0.56
PKP4-215ENST00000494945 VNN2O95498 520 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 CXCR5P32302 372 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 CTNNB1P35222 781 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 NOS2P35228 1153 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 PCK1P35558 622 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 MATKP42679 507 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 PAFAH1B1P43034 410 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 TUFMP49411 452 aaKnown RBP11.55□□□□□ -0.56
PKP4-215ENST00000494945 NDUFV1P49821 464 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 CDR1P51861 262 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RABGGTBP53611 331 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 SLC5A3P53794 718 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RWDD2BP57060 319 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 UBE3AQ05086 875 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RAB33AQ14088 237 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 HADHQ16836 314 aaKnown RBP11.55□□□□□ -0.56
PKP4-215ENST00000494945 C9orf50Q5SZB4 431 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 CCDC181Q5TID7 509 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 TRNP1Q6NT89 227 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 BEND5Q7L4P6 421 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 POLNQ7Z5Q5 900 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 CPNE8Q86YQ8 564 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 CREG2Q8IUH2 290 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 NUP93Q8N1F7 819 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 KLHL23Q8NBE8 558 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 ATAD1Q8NBU5 361 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 COG1Q8WTW3 980 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 KRT35Q92764 455 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 GOLGA1Q92805 767 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 FAM149B1Q96BN6 582 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RPGRIP1Q96KN7 1286 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
PKP4-215ENST00000494945 SAMD11Q96NU1 681 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 SLC2A13Q96QE2 648 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 PSMB7Q99436 277 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 DDX23Q9BUQ8 820 aaKnown RBP11.55□□□□□ -0.56
PKP4-215ENST00000494945 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 POPDC2Q9HBU9 364 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RXFP1Q9HBX9 757 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 RRN3Q9NYV6 651 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 TTC7AQ9ULT0 858 aaPredicted RBP11.55□□□□□ -0.56
PKP4-215ENST00000494945 DOCK6Q96HP0 2047 aa11.55□□□□□ -0.56
PKP4-215ENST00000494945 SHROOM3Q8TF72 1996 aa11.54□□□□□ -0.56
PKP4-215ENST00000494945 C5orf67F2Z3F1 127 aa11.54□□□□□ -0.56
PKP4-215ENST00000494945 LTFP02788 710 aa11.54□□□□□ -0.56
PKP4-215ENST00000494945 RB1P06400 928 aa11.54□□□□□ -0.56
PKP4-215ENST00000494945 KRT7P08729 469 aa11.54□□□□□ -0.56
PKP4-215ENST00000494945 RPL17P18621 184 aaKnown RBP11.54□□□□□ -0.56
PKP4-215ENST00000494945 SSR1P43307 286 aaKnown RBP11.54□□□□□ -0.56
PKP4-215ENST00000494945 MARCKSL1P49006 195 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms