RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 LRRC32Q14392 662 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 PDGFRLQ15198 375 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 CC2D1AQ6P1N0 951 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-209ENST00000494464 TXNDC11Q6PKC3 985 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 TTC39CQ8N584 583 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 ENOX1Q8TC92 643 aaKnown RBP13.97□□□□□ -0.17
ERCC3-209ENST00000494464 SLC2A14Q8TDB8 520 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 OSCP1Q8WVF1 389 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 CEP63Q96MT8 703 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 TWNKQ96RR1 684 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 KCNK16Q96T55 309 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 NT5C1AQ9BXI3 368 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 DNAI2Q9GZS0 605 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 SEMA4AQ9H3S1 761 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 RAB20Q9NX57 234 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 ARMCX3Q9UH62 379 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-209ENST00000494464 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 COQ4Q9Y3A0 265 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 AP1G2O75843 785 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 YWHAQP27348 245 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 MTAPQ13126 283 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 CBWD6Q4V339 395 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 DCAF17Q5H9S7 520 aaPredicted RBP13.96□□□□□ -0.17
ERCC3-209ENST00000494464 CBWD3Q5JTY5 395 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 CBWD5Q5RIA9 395 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 ISM2Q6H9L7 571 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 TTI2Q6NXR4 508 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 C12orf29Q8N999 325 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 ZMIZ2Q8NF64 920 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 SH3RF2Q8TEC5 729 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 WHAMMQ8TF30 809 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 NKD2Q969F2 451 aaPredicted RBP13.96□□□□□ -0.17
ERCC3-209ENST00000494464 FBXO32Q969P5 355 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 SLC35C1Q96A29 364 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 CYP2S1Q96SQ9 504 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.17
ERCC3-209ENST00000494464 SMOQ99835 787 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 EBF3Q9H4W6 596 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 LMAN1LQ9HAT1 526 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 METTL14Q9HCE5 456 aaKnown RBP13.96□□□□□ -0.17
ERCC3-209ENST00000494464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.96□□□□□ -0.176e-7■■■■■ 168.7
ERCC3-209ENST00000494464 FAM49BQ9NUQ9 324 aa13.96□□□□□ -0.17
ERCC3-209ENST00000494464 BICDL2A1A5D9 508 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 FAM200BP0CF97 657 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 IFNAR2P48551 515 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 TUBP50607 506 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 IFRD2Q12894 506 aaPredicted RBP13.96□□□□□ -0.18
ERCC3-209ENST00000494464 CCINQ13939 588 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 WDR44Q5JSH3 913 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 DGKKQ5KSL6 1271 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 ASCL5Q7RTU5 278 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 CPA6Q8N4T0 437 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 TTC8Q8TAM2 541 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 NELL1Q92832 810 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 ATP2A3Q93084 1043 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 CHFRQ96EP1 664 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 HSD3B7Q9H2F3 369 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.18
ERCC3-209ENST00000494464 KIAA1549LQ6ZVL6 1849 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 OTOL1A6NHN0 477 aaPredicted RBP13.95□□□□□ -0.18
ERCC3-209ENST00000494464 PMM2O15305 246 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 BEST1O76090 585 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 ZDHHC11BP0C7U3 371 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 ARSAP15289 507 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 CD58P19256 250 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 MSNP26038 577 aaKnown RBP13.95□□□□□ -0.18
ERCC3-209ENST00000494464 CCR3P51677 355 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 ZXDBP98169 803 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 AMPD2Q01433 879 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 PON2Q15165 354 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 EML3Q32P44 896 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 CLEC20AQ6ZU45 233 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 FILIP1Q7Z7B0 1213 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.18
ERCC3-209ENST00000494464 SYNPOQ8N3V7 929 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 SCAMP5Q8TAC9 235 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 CYFIP2Q96F07 1278 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
ERCC3-209ENST00000494464 FAM126AQ9BYI3 521 aaPredicted RBP13.95□□□□□ -0.18
ERCC3-209ENST00000494464 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 DUS2Q9NX74 493 aaKnown RBP13.95□□□□□ -0.18
ERCC3-209ENST00000494464 PCDHGA2Q9Y5H1 932 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 WNT6Q9Y6F9 365 aa13.95□□□□□ -0.18
ERCC3-209ENST00000494464 LEFTY2O00292 366 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 TRDMT1O14717 391 aaKnown RBP13.94□□□□□ -0.18
ERCC3-209ENST00000494464 PAPSS2O95340 614 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-209ENST00000494464 TDGF1P13385 188 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 ADORA2BP29275 332 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 MAP3K7CLP57077 242 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 PAK1Q13153 545 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 GAS6Q14393 721 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 TMEM196Q5HYL7 178 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 KLHL10Q6JEL2 608 aa13.94□□□□□ -0.18
ERCC3-209ENST00000494464 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms