RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 LRRC52Q8N7C0 313 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 KREMEN2Q8NCW0 462 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RAB3IL1Q8TBN0 382 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 FAM71BQ8TC56 605 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 LRRC45Q96CN5 670 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 AP1M1Q9BXS5 423 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ELOVL4Q9GZR5 314 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 DPH5Q9H2P9 285 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 APOBEC3GQ9HC16 384 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 MED4Q9NPJ6 270 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ASAH2Q9NR71 780 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 PLK2Q9NYY3 685 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 DPP7Q9UHL4 492 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 IKBKGQ9Y6K9 419 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 LAMA4Q16363 1823 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PFKMP08237 780 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 RFC2P35250 354 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 MAGEA9P43362 315 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ACADSBP45954 432 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 RECQLP46063 649 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 WNT7BP56706 349 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 GCNT1Q02742 428 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CALCOCO2Q13137 446 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 UAP1Q16222 522 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 DBN1Q16643 649 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ZCWPW2Q504Y3 356 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PLEKHG4Q58EX7 1191 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 EFHC1Q5JVL4 640 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 IL31Q6EBC2 164 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 DARS2Q6PI48 645 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC149Q6ZUS6 474 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 DEFB106AQ8N104 65 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 RNF10Q8N5U6 811 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 RXFP2Q8WXD0 754 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 MAGOHBQ96A72 148 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PABPC5Q96DU9 382 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 KREMEN1Q96MU8 473 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 SLC9A7Q96T83 725 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CAPS2Q9BXY5 557 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CIPCQ9C0C6 399 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 HAPLN2Q9GZV7 340 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 IQCGQ9H095 443 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 WNT8AQ9H1J5 351 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 WDCPQ9H6R7 721 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 EHD2Q9NZN4 543 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 HMGXB4Q9UGU5 601 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 FBXL21Q9UKT6 434 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CDH9Q9ULB4 789 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 DUSP10Q9Y6W6 482 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PTPRJQ12913 1337 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 USP27XA6NNY8 438 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ANKRD65E5RJM6 399 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 NEMP1O14524 444 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 SMIM24O75264 130 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 EPHB2P29323 1055 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 NNMTP40261 264 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 EPHB1P54762 984 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TPI1P60174 286 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TAF10Q12962 218 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 FAM187BQ17R55 369 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CLLU1OSQ5K130 101 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ATAT1Q5SQI0 421 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 SH2D4BQ5SQS7 431 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CRELD2Q6UXH1 353 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CEP128Q6ZU80 1094 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 FAM35AQ86V20 835 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PCED1BQ96HM7 432 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 EDEM3Q9BZQ6 932 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 MUC3BQ9H195 1237 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CXCL16Q9H2A7 254 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 VCX3BQ9H321 246 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 OSGEPQ9NPF4 335 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TLR8Q9NR97 1041 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TAS2R14Q9NYV8 317 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ARHGAP20Q9P2F6 1191 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 MTRF1LQ9UGC7 380 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 FBXL5Q9UKA1 691 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ADGRG1Q9Y653 693 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 H0Y626 953 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 H3BQ06 376 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PFDN1O60925 122 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 PPP1R37O75864 691 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 SEC31AO94979 1220 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 GJB5O95377 273 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 VNN1O95497 513 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 NPR3P17342 541 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 GPD1P21695 349 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 KCNA5P22460 613 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ETFBP38117 255 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 IFNAR2P48551 515 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 RWDD2BP57060 319 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 BIRC2Q13490 618 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 MTMR3Q13615 1198 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ZKSCAN8Q15776 578 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 SNCBQ16143 134 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 SOWAHAQ2M3V2 549 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms