RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 LAIR1Q6GTX8 287 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 ARL14EPQ8N8R7 260 aaPredicted RBP11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 EEF2KMTQ96G04 330 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 PCED1BQ96HM7 432 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 FUBP3Q96I24 572 aaKnown RBP eCLIP11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 DUSP9Q99956 384 aaKnown RBP11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 IMPG2Q9BZV3 1241 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 UXTQ9UBK9 157 aaPredicted RBP11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 CDH9Q9ULB4 789 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 TRAV19A0A0A6YYK7 116 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 DCDC2BA2VCK2 349 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 TRDMT1O14717 391 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 RNF40O75150 1001 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 CKMP06732 381 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 FAM163BP0C2L3 166 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 TRIM21P19474 475 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 GJA4P35212 333 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 MTIF2P46199 727 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 ZNF165P49910 485 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 GALK1P51570 392 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 ZNF445P59923 1031 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 EML3Q32P44 896 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 ZSCAN23Q3MJ62 389 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 DCAF17Q5H9S7 520 aaPredicted RBP11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 KRT39Q6A163 491 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 DPH6Q7L8W6 267 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 WDR5BQ86VZ2 330 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 ZC3H3Q8IXZ2 948 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 FAM160A2Q8N612 972 aaPredicted RBP11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 TAF4BQ92750 862 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 BPIFA3Q9BQP9 254 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 ECT2Q9H8V3 914 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 EHD2Q9NZN4 543 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 RAB23Q9ULC3 237 aa11.71□□□□□ -0.53
TMEM39A-211ENST00000491685 LRRIQ3A6PVS8 624 aaPredicted RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 F8VP50 259 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 GOLGA6L19H0YKK7 550 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 SCAMP3O14828 347 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 P4HA2O15460 535 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 C4BPAP04003 597 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 RETP07949 1114 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 GRIK1P39086 918 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 RAP1GAPP47736 663 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 PDE6CP51160 858 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 MARSP56192 900 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 MCCD1P59942 119 aaPredicted RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 MYL6P60660 151 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 MYL5Q02045 173 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 GRSF1Q12849 480 aaKnown RBP eCLIP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 PDGFRLQ15198 375 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 MAPRE1Q15691 268 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 CCDC6Q16204 474 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 GAB4Q2WGN9 574 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 ANO6Q4KMQ2 910 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 CC2D1AQ6P1N0 951 aaPredicted RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 C4orf50Q6ZRC1 276 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 SV2AQ7L0J3 742 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 SYNPOQ8N3V7 929 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 MYCBPAPQ8TBZ2 947 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 SH3RF2Q8TEC5 729 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 OSCP1Q8WVF1 389 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 HHIPQ96QV1 700 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 ZNF518BQ9C0D4 1074 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 XYLT2Q9H1B5 865 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 LINC00597Q9H2U6 94 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 SMYD3Q9H7B4 428 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 MMRN2Q9H8L6 949 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 TMEM8AQ9HCN3 771 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 SEMA4GQ9NTN9 838 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 DUS2Q9NX74 493 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 NFE2L3Q9Y4A8 694 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 CACNA1GO43497 2377 aa11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 TNRC6BQ9UPQ9 1833 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-211ENST00000491685 CLDN5O00501 218 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 GDF9O60383 454 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 EEF1GP26641 437 aaKnown RBP11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 HOXA6P31267 233 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 IFNAR2P48551 515 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 DLG4P78352 724 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 ZACNQ401N2 412 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 TDRD10Q5VZ19 366 aaKnown RBP11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 PRR23CQ6ZRP0 262 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 CPA6Q8N4T0 437 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 FAXDC2Q96IV6 333 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 CEP295NLQ96MC4 621 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 P2RY13Q9BPV8 354 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 TTLL2Q9BWV7 592 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 B3GNT5Q9BYG0 378 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 RNF38Q9H0F5 515 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 SDCBP2Q9H190 292 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms