RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 PRMT8Q9NR22 394 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-206ENST00000490831 LEFTY2O00292 366 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 FGFR1OPO95684 399 aaKnown RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 SP9P0CG40 484 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 ARSAP15289 507 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 TBXAS1P24557 533 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 YWHAEP62258 255 aaKnown RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 IFRD2Q12894 506 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 EML3Q32P44 896 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 ZNF394Q53GI3 561 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 GPRIN1Q7Z2K8 1008 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 ALYREFQ86V81 257 aaKnown RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 MLKLQ8NB16 471 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 TTC8Q8TAM2 541 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 ATP2A3Q93084 1043 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 ZFRQ96KR1 1074 aaKnown RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 HEXIM2Q96MH2 286 aaKnown RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 UBXN6Q9BZV1 441 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 LMBRD1Q9NUN5 540 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 SPATA6Q9NWH7 488 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 DUS2Q9NX74 493 aaKnown RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 GMIPQ9P107 970 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 CHORDC1Q9UHD1 332 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-206ENST00000490831 SCML2Q9UQR0 700 aa16.08■□□□□ 0.16
COL27A1-206ENST00000490831 MYH10P35580 1976 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 FANCMQ8IYD8 2048 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 USP34Q70CQ2 3546 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 TRDMT1O14717 391 aaKnown RBP16.07■□□□□ 0.16
COL27A1-206ENST00000490831 COCHO43405 550 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 LAMTOR5O43504 91 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 KIF11P52732 1056 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 CETN1Q12798 172 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 KCNH2Q12809 1159 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 MTAPQ13126 283 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 CCINQ13939 588 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 LRRC32Q14392 662 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 TMEM196Q5HYL7 178 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 DGKKQ5KSL6 1271 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 HECTD3Q5T447 861 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 DDX42Q86XP3 938 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL27A1-206ENST00000490831 SYNPOQ8N3V7 929 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 CPA6Q8N4T0 437 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 NELL1Q92832 810 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 NT5C1BQ96P26 610 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 ECT2Q9H8V3 914 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 CPQQ9Y646 472 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 WNT6Q9Y6F9 365 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 USP3Q9Y6I4 520 aa16.07■□□□□ 0.16
COL27A1-206ENST00000490831 ABL1P00519 1130 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 CCDC192P0DO97 292 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 IFNAR2P48551 515 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 PGFP49763 221 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 AMPD2Q01433 879 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 GAS6Q14393 721 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 PON2Q15165 354 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 CCDC186Q7Z3E2 898 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 ANKRD52Q8NB46 1076 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 LINC00597Q9H2U6 94 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 CCSER2Q9H7U1 834 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 CYLDQ9NQC7 956 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 TLR8Q9NR97 1041 aaKnown RBP16.06■□□□□ 0.16
COL27A1-206ENST00000490831 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL27A1-206ENST00000490831 DMDP11532 3685 aa16.06■□□□□ 0.16
COL27A1-206ENST00000490831 PAPSS2O95340 614 aaPredicted RBP16.05■□□□□ 0.16
COL27A1-206ENST00000490831 AFPP02771 609 aaKnown RBP16.05■□□□□ 0.16
COL27A1-206ENST00000490831 MBL2P11226 248 aaPredicted RBP16.05■□□□□ 0.16
COL27A1-206ENST00000490831 TDGF1P13385 188 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 ACO1P21399 889 aaKnown RBP16.05■□□□□ 0.16
COL27A1-206ENST00000490831 GJA4P35212 333 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 GCNT1Q02742 428 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 LRMPQ12912 555 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 RAB41Q5JT25 222 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 IRF2BP1Q8IU81 584 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 SPEM1Q8N4L4 309 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 NUP62CLQ9H1M0 184 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 SEMA4AQ9H3S1 761 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
COL27A1-206ENST00000490831 SMPD4Q9NXE4 827 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 KIAA1257Q9ULG3 409 aa16.05■□□□□ 0.16
COL27A1-206ENST00000490831 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 SLC9A3R1O14745 358 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-206ENST00000490831 CYP26A1O43174 497 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 TLR5O60602 858 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 NFATC1O95644 943 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 PAEPP09466 180 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 VDRP11473 427 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 CCR3P51677 355 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 NR1H3Q13133 447 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 SGO2Q562F6 1265 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 FSTL4Q6MZW2 842 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 KLHDC10Q6PID8 442 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 TTC30AQ86WT1 665 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 ADGRG2Q8IZP9 1017 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 CNOT6LQ96LI5 555 aaKnown RBP16.04■□□□□ 0.16
COL27A1-206ENST00000490831 FAM126AQ9BYI3 521 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-206ENST00000490831 OSER1Q9NX31 292 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 CFAP97Q9P2B7 532 aa16.04■□□□□ 0.16
COL27A1-206ENST00000490831 ZFHX2Q9C0A1 2572 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms