RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ZBTB8AQ96BR9 441 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 CENPTQ96BT3 561 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 TLCD1Q96CP7 247 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 DHTKD1Q96HY7 919 aaPredicted RBP3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 CCDC43Q96MW1 224 aaKnown RBP3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 GDAP1L1Q96MZ0 367 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 ALS2CR12Q96Q35 445 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 RUFY1Q96T51 708 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 SYT17Q9BSW7 474 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 JAM3Q9BX67 310 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 TLR10Q9BXR5 811 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 SLC26A6Q9BXS9 759 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 EDEM3Q9BZQ6 932 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 TMEM39BQ9GZU3 492 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 AP5M1Q9H0R1 490 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 TAOK3Q9H2K8 898 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 NDST4Q9H3R1 872 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 CCDC134Q9H6E4 229 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 NHEJ1Q9H9Q4 299 aaPredicted RBP3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 MAGEF1Q9HAY2 307 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 SPON1Q9HCB6 807 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 SLC6A20Q9NP91 592 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 CLDND1Q9NY35 253 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 MYOTQ9UBF9 498 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 KCNG1Q9UIX4 513 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 CORO1CQ9ULV4 474 aaPredicted RBP3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 G3BP2Q9UN86 482 aaKnown RBP3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 SIK3Q9Y2K2 1263 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 PCDHB4Q9Y5E5 795 aa3.72□□□□□ -1.81
CRNKL1-203ENST00000490258 TRAV20A0A0B4J274 112 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 KLRG2A4D1S0 409 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 BTNL10A8MVZ5 291 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ACOT7O00154 380 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ARVCFO00192 962 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 PSMA7O14818 248 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 NKRFO15226 690 aaKnown RBP eCLIP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 PRPF3O43395 683 aaKnown RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 KLRC4O43908 158 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ORC4O43929 436 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 USO1O60763 962 aaKnown RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 PLEKHA8P1O95397 391 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ATP6V1G2O95670 118 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 KRT14P02533 472 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 LTFP02788 710 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 FAM153BP0C7A2 387 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ZBTB48P10074 688 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 PDHBP11177 359 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 AKR1B1P15121 316 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 GRK2P25098 689 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 GRK3P35626 688 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 LONP1P36776 959 aaKnown RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 PRCPP42785 496 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CCNHP51946 323 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 KIF11P52732 1056 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 RWDD2BP57060 319 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 RHBDL3P58872 404 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ELF3P78545 371 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 UBXN1Q04323 297 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 IFT88Q13099 833 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CUL1Q13616 776 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 BLMHQ13867 455 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ZNF268Q14587 947 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 SEC23AQ15436 765 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 SPA17Q15506 151 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 UAP1Q16222 522 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 KIAA0753Q2KHM9 967 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 SLC35G1Q2M3R5 365 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 FAM153CQ494X1 144 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CFAP221Q4G0U5 840 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CAVIN4Q5BKX8 364 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 MIIPQ5JXC2 388 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 KIAA1755Q5JYT7 1200 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 TTC38Q5R3I4 469 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 AKNAD1Q5T1N1 836 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 RRAGBQ5VZM2 374 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 KLHL10Q6JEL2 608 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CDC42EP5Q6NZY7 148 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 NSMFQ6X4W1 530 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 USP53Q70EK8 1073 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 STK32CQ86UX6 486 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 FAM114A1Q8IWE2 563 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CACNA2D3Q8IZS8 1091 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 TMTC2Q8N394 836 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 DTX3Q8N9I9 347 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CFAP61Q8NHU2 1237 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 PHOSPHO1Q8TCT1 267 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 SMCR8Q8TEV9 937 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 USP33Q8TEY7 942 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CASKIN2Q8WXE0 1202 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 SYN2Q92777 582 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CUL5Q93034 780 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CHFRQ96EP1 664 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 EPSTI1Q96J88 318 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CAPZA3Q96KX2 299 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC114Q96M63 670 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 ZNF317Q96PQ6 595 aaPredicted RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 STRBPQ96SI9 672 aaKnown RBP3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 SH3GL3Q99963 347 aa3.71□□□□□ -1.82
CRNKL1-203ENST00000490258 IFIH1Q9BYX4 1025 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms