RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 NOLC1Q14978 699 aaKnown RBP eCLIP16.17■□□□□ 0.18
UFD1-209ENST00000489406 CALCRLQ16602 461 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 DHX40Q8IX18 779 aaKnown RBP16.17■□□□□ 0.18
UFD1-209ENST00000489406 TERB1Q8NA31 727 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 IGSF8Q969P0 613 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 HIC2Q96JB3 615 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 CNDP2Q96KP4 475 aaKnown RBP16.17■□□□□ 0.18
UFD1-209ENST00000489406 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 TMEM134Q9H6X4 195 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 PLEKHA5Q9HAU0 1116 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 TUFT1Q9NNX1 390 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 SMPD4Q9NXE4 827 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 DSEQ9UL01 958 aa16.17■□□□□ 0.18
UFD1-209ENST00000489406 BOD1L1Q8NFC6 3051 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 KCNJ18B7U540 433 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 CYB561D2O14569 222 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 XPOTO43592 962 aaKnown RBP16.16■□□□□ 0.18
UFD1-209ENST00000489406 AFPP02771 609 aaKnown RBP16.16■□□□□ 0.18
UFD1-209ENST00000489406 GLDCP23378 1020 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 NPTX2P47972 431 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 PDE6CP51160 858 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 GAD2Q05329 585 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
UFD1-209ENST00000489406 BTBD8Q5XKL5 378 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 WSCD1Q658N2 575 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 LAYNQ6UX15 382 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 NUDT18Q6ZVK8 323 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 GATAD2AQ86YP4 633 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 ETFBKMTQ8IXQ9 262 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 EXD3Q8N9H8 876 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 KCNE4Q8WWG9 221 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 SNX19Q92543 992 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 MTMR9Q96QG7 549 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 RPF1Q9H9Y2 349 aaKnown RBP16.16■□□□□ 0.18
UFD1-209ENST00000489406 ITM2CQ9NQX7 267 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 STARD13Q9Y3M8 1113 aa16.16■□□□□ 0.18
UFD1-209ENST00000489406 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.16■□□□□ 0.18
UFD1-209ENST00000489406 ACADVLP49748 655 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 PPP2R3AQ06190 1150 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 TEAD4Q15561 434 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 C9orf57Q5W0N0 161 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 ZNF578Q96N58 590 aaPredicted RBP16.15■□□□□ 0.18
UFD1-209ENST00000489406 GABRG3Q99928 467 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
UFD1-209ENST00000489406 RNF38Q9H0F5 515 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 CFAP97Q9P2B7 532 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 CPQQ9Y646 472 aa16.15■□□□□ 0.18
UFD1-209ENST00000489406 WASH3PC4AMC7 463 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 TOM1L1O75674 476 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
UFD1-209ENST00000489406 CLTAP09496 248 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 PAX3P23760 479 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
UFD1-209ENST00000489406 NFE2Q16621 373 aaPredicted RBP16.14■□□□□ 0.17
UFD1-209ENST00000489406 TSGA10IPQ3SY00 556 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 SPATA1Q5VX52 437 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 METTL3Q86U44 580 aaKnown RBP16.14■□□□□ 0.17
UFD1-209ENST00000489406 KRI1Q8N9T8 703 aaKnown RBP16.14■□□□□ 0.17
UFD1-209ENST00000489406 HSPBP1Q9NZL4 362 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 USP36Q9P275 1121 aaKnown RBP16.14■□□□□ 0.17
UFD1-209ENST00000489406 SEPT3Q9UH03 358 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 CLCA2Q9UQC9 943 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 PCDHB6Q9Y5E3 794 aa16.14■□□□□ 0.17
UFD1-209ENST00000489406 SUV39H1O43463 412 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 PDIA3P30101 505 aaKnown RBP16.13■□□□□ 0.17
UFD1-209ENST00000489406 GRIK1P39086 918 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 MATR3P43243 847 aaKnown RBP eCLIP16.13■□□□□ 0.17
UFD1-209ENST00000489406 TPMTP51580 245 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 SLC7A9P82251 487 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 TSPY1Q01534 308 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 KRT32Q14532 448 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 KCNT1Q5JUK3 1230 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 SCN4BQ8IWT1 228 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 FAM177A1Q8N128 213 aaPredicted RBP16.13■□□□□ 0.17
UFD1-209ENST00000489406 KIAA1958Q8N8K9 716 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 ARHGAP28Q9P2N2 729 aa16.13■□□□□ 0.17
UFD1-209ENST00000489406 PIRO00625 290 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 CLDN3O15551 220 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 PAPSS1O43252 624 aaPredicted RBP16.12■□□□□ 0.17
UFD1-209ENST00000489406 OXTRP30559 389 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 ANO4Q32M45 955 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 PRAMEF14Q5SWL7 426 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 HIST2H2BCQ6DN03 193 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 KDM7AQ6ZMT4 941 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 HAPLN2Q9GZV7 340 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 TM9SF3Q9HD45 589 aa16.12■□□□□ 0.17
UFD1-209ENST00000489406 PRRT4C9JH25 899 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 K7ENP7 123 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 MPOP05164 745 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 PFKLP17858 780 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 CTSKP43235 329 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 GRIA4P48058 902 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 MCL1Q07820 350 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 FUT11Q495W5 492 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 GRAMD4Q6IC98 578 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 JADE1Q6IE81 842 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 INO80CQ6PI98 192 aaPredicted RBP16.11■□□□□ 0.17
UFD1-209ENST00000489406 EID2Q8N6I1 236 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms