RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 KMT5AQ9NQR1 393 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 HCN2Q9UL51 889 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.88□□□□□ -0.83
SSBP1-212ENST00000489378 PCDHB5Q9Y5E4 795 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 A0A1W2PQF6 199 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 BTBD18B2RXH4 712 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 E9PAM4 449 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 LEFTY2O00292 366 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 SLC16A4O15374 487 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 SIAH2O43255 324 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 HIP1RO75146 1068 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 WISP1O95388 367 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 CLTAP09496 248 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 ZNF883P0CG24 379 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 HDCP19113 662 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 NDUFV2P19404 249 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 GRIA2P42262 883 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 TNFRSF4P43489 277 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 CLDN6P56747 220 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 ATP2C1P98194 919 aaPredicted RBP9.87□□□□□ -0.83
SSBP1-212ENST00000489378 MCL1Q07820 350 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 SMARCB1Q12824 385 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 RESTQ13127 1097 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 KCNB1Q14721 858 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 HLA-BQ31612 363 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 SYCP2LQ5T4T6 812 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 SPATA1Q5VX52 437 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 RHBDF2Q6PJF5 856 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 RETREG3Q86VR2 466 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 MIB1Q86YT6 1006 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 THEM5Q8N1Q8 247 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 ZCCHC9Q8N567 271 aaKnown RBP9.87□□□□□ -0.83
SSBP1-212ENST00000489378 NXPE2Q96DL1 559 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 MYRFLQ96LU7 910 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 CD248Q9HCU0 757 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 UXTQ9UBK9 157 aaPredicted RBP9.87□□□□□ -0.83
SSBP1-212ENST00000489378 TCHHQ07283 1943 aa9.87□□□□□ -0.83
SSBP1-212ENST00000489378 A0A1B0GTW7 788 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 PIRO00625 290 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 CYB561D2O14569 222 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 CLDN3O15551 220 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 FLRT2O43155 660 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 RRP8O43159 456 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 NDUFS2O75306 463 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 ZNF217O75362 1048 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 WFS1O76024 890 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 CER1O95813 267 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 HOXB2P14652 356 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 SNRPBP14678 240 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 CYP2F1P24903 491 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 KRT2P35908 639 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 EIF2DP41214 584 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 MATKP42679 507 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 PPP2R3AQ06190 1150 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 MAPK7Q13164 816 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 ENOX2Q16206 610 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 PTPRNQ16849 979 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 TAF1BQ53T94 588 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 WDR45BQ5MNZ6 344 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 CPLX2Q6PUV4 134 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 METTL23Q86XA0 190 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 FMNL3Q8IVF7 1028 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 DCP1BQ8IZD4 617 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 ZNF513Q8N8E2 541 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 PYM1Q9BRP8 204 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 DSEQ9UL01 958 aa9.86□□□□□ -0.83
SSBP1-212ENST00000489378 RBM19Q9Y4C8 960 aaKnown RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-212ENST00000489378 ANO9A1A5B4 782 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 SFI1A8K8P3 1242 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 B8ZZF3 427 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 ERVH48-1M5A8F1 160 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 TNFSF14O43557 240 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 XPOTO43592 962 aaKnown RBP9.85□□□□□ -0.83
SSBP1-212ENST00000489378 NFICP08651 508 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 XBP1P17861 261 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 MATR3P43243 847 aaKnown RBP eCLIP9.85□□□□□ -0.83
SSBP1-212ENST00000489378 CXADRP78310 365 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 TLE3Q04726 772 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 CCDC142Q17RM4 750 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 JADE1Q6IE81 842 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 ERMNQ8TAM6 284 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 DNASE2BQ8WZ79 361 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 FOXJ1Q92949 421 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 ZNF274Q96GC6 653 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-212ENST00000489378 ACOX2Q99424 681 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 ARID3AQ99856 593 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 RUSC1Q9BVN2 902 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 MIR1-1HGQ9H1L0 117 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 PCDHGB2Q9Y5G2 931 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 SPTAN1Q13813 2472 aaKnown RBP9.85□□□□□ -0.83
SSBP1-212ENST00000489378 MYO9AB2RTY4 2548 aa9.85□□□□□ -0.83
SSBP1-212ENST00000489378 TMEM131Q92545 1883 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 TEP1Q99973 2627 aaKnown RBP9.84□□□□□ -0.83
SSBP1-212ENST00000489378 TBC1D3BA6NDS4 549 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 MEI4A8MW99 385 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-212ENST00000489378 FAM189A1O60320 539 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 ADH1CP00326 375 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 ADRB2P07550 413 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms