RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 KCTD6Q8NC69 237 aa21.1■□□□□ 0.97
ATP1A1-208ENST00000488733 LRRC45Q96CN5 670 aa21.1■□□□□ 0.97
ATP1A1-208ENST00000488733 SUSD3Q96L08 255 aa21.1■□□□□ 0.97
ATP1A1-208ENST00000488733 FRMD8P1Q9BZ68 369 aaPredicted RBP21.1■□□□□ 0.97
ATP1A1-208ENST00000488733 PCSK1NQ9UHG2 260 aa21.1■□□□□ 0.97
ATP1A1-208ENST00000488733 FAM153AQ9UHL3 310 aa21.1■□□□□ 0.97
ATP1A1-208ENST00000488733 CLDN5O00501 218 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 KRT10P13645 584 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TYMPP19971 482 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 RFC2P35250 354 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 DSC1Q08554 894 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 SNX1Q13596 522 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TAF5Q15542 800 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 KAZNQ674X7 775 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 CLEC20AQ6ZU45 233 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 ANKS1BQ7Z6G8 1248 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 UBE2Q1Q7Z7E8 422 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TTC13Q8NBP0 860 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TBCBQ99426 244 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TRIM31Q9BZY9 425 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 LRRC4Q9HBW1 653 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 MED4Q9NPJ6 270 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 R3HDM2Q9Y2K5 976 aaKnown RBP21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TRIM43BA6NCK2 446 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TMEM189-UBE2V1I3L0A0 370 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 KIAA0355O15063 1070 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 BRCC3P46736 316 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 CBX1P83916 185 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 C15orf59Q2T9L4 293 aaPredicted RBP21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 HSP90B2PQ58FF3 399 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TEKT4Q8WW24 435 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 ATG4AQ8WYN0 398 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 TRIM43Q96BQ3 446 aaPredicted RBP21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 PCED1BQ96HM7 432 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 CFAP57Q96MR6 1250 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 PCDHB7Q9Y5E2 793 aa21.09■□□□□ 0.97
ATP1A1-208ENST00000488733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 MYBPHLA2RUH7 354 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 HSF2BPO75031 334 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 FBXO21O94952 628 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 TIMP1P01033 207 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 HSPA9P38646 679 aaKnown RBP21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 MAPRE1Q15691 268 aaKnown RBP21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 SMTNL2Q2TAL5 461 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 KCNT1Q5JUK3 1230 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 FAM35AQ86V20 835 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 MAP7D3Q8IWC1 876 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 FAM172AQ8WUF8 416 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 ACSF2Q96CM8 615 aaPredicted RBP21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 DDX23Q9BUQ8 820 aaKnown RBP21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 KRT82Q9NSB4 513 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 PCDHB8Q9UN66 801 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 DRG1Q9Y295 367 aaKnown RBP21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 SNX24Q9Y343 169 aa21.08■□□□□ 0.97
ATP1A1-208ENST00000488733 MKI67P46013 3256 aaKnown RBP21.08■□□□□ 0.96
ATP1A1-208ENST00000488733 GOLGA6BA6NDN3 693 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 AP1G2O75843 785 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 ENDOD1O94919 500 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 MRPS5P82675 430 aaKnown RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 ATP11AP98196 1134 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 KRT17Q04695 432 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 ADIGQ0VDE8 80 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 PTK6Q13882 451 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 PDK2Q15119 407 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 CDO1Q16878 200 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 PAN2Q504Q3 1202 aaKnown RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 INTS6LQ5JSJ4 861 aaKnown RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 FAM171BQ6P995 826 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 CNKSR3Q6P9H4 555 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 SIX6OS1Q8N1H7 587 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 HSPH1Q92598 858 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 CENPIQ92674 756 aaPredicted RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 SMARCD1Q96GM5 515 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 CCDC114Q96M63 670 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 FAM193BQ96PV7 902 aaPredicted RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 FMO2Q99518 471 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 NGRNQ9NPE2 291 aaKnown RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 ZDHHC18Q9NUE0 388 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.07■□□□□ 0.964e-7■■□□□ 13.1
ATP1A1-208ENST00000488733 LRFN2Q9ULH4 789 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 I3L4J1 428 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 LIASO43766 372 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 ITGB8P26012 769 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 RPL21P46778 160 aaKnown RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 MAP3K7CLP57077 242 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 RNASELQ05823 741 aaKnown RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 SH3PXD2AQ5TCZ1 1133 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 OVOS1Q6IE37 1185 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 BBS12Q6ZW61 710 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 VSIG1Q86XK7 387 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 COLGALT2Q8IYK4 626 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 ABI1Q8IZP0 508 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 CLEC4CQ8WTT0 213 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 VWCEQ96DN2 955 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 RTP3Q9BQQ7 232 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 C11orf84Q9BUA3 381 aaPredicted RBP21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 NEUROG2Q9H2A3 272 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 TBC1D13Q9NVG8 400 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 WHRNQ9P202 907 aa21.07■□□□□ 0.96
ATP1A1-208ENST00000488733 TRAPPC3O43617 180 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms