RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 EXOC4Q96A65 974 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 TWNKQ96RR1 684 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 CSNK1G1Q9HCP0 422 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 CHORDC1Q9UHD1 332 aaPredicted RBP20.49■□□□□ 0.87
CD55-209ENST00000488171 FAM92AA1XBS5 289 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 SCAMP3O14828 347 aaKnown RBP20.48■□□□□ 0.87
CD55-209ENST00000488171 COCHO43405 550 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 KRT13P13646 458 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 OPRD1P41143 372 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 PXNP49023 591 aaPredicted RBP20.48■□□□□ 0.87
CD55-209ENST00000488171 FOXK2Q01167 660 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 INCA1Q0VD86 236 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 PNOCQ13519 176 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 ADGRG2Q8IZP9 1017 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 ZFRQ96KR1 1074 aaKnown RBP20.48■□□□□ 0.87
CD55-209ENST00000488171 FAM49BQ9NUQ9 324 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 COMMD8Q9NX08 183 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 DLL3Q9NYJ7 618 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 CFAP97Q9P2B7 532 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 SLC8A2Q9UPR5 921 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 ATG2BQ96BY7 2078 aa20.48■□□□□ 0.87
CD55-209ENST00000488171 CYP17A1P05093 508 aa20.47■□□□□ 0.87
CD55-209ENST00000488171 ZDHHC11BP0C7U3 371 aa20.47■□□□□ 0.87
CD55-209ENST00000488171 MBL2P11226 248 aaPredicted RBP20.47■□□□□ 0.87
CD55-209ENST00000488171 EDRF1Q3B7T1 1238 aa20.47■□□□□ 0.87
CD55-209ENST00000488171 RPLP0P6Q8NHW5 317 aa20.47■□□□□ 0.87
CD55-209ENST00000488171 IMPG2Q9BZV3 1241 aa20.47■□□□□ 0.87
CD55-209ENST00000488171 MMRN2Q9H8L6 949 aa20.47■□□□□ 0.87
CD55-209ENST00000488171 GMIPQ9P107 970 aa20.47■□□□□ 0.87
CD55-209ENST00000488171 CCDC163A0A0D9SF12 145 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 RETP07949 1114 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 PGFP49763 221 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 MAP3K7CLP57077 242 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 SPEM2Q0P670 501 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 PUM1Q14671 1186 aaKnown RBP eCLIP20.46■□□□□ 0.87
CD55-209ENST00000488171 DHCR24Q15392 516 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 RSPO4Q2I0M5 234 aaPredicted RBP20.46■□□□□ 0.87
CD55-209ENST00000488171 HECTD3Q5T447 861 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 DDX42Q86XP3 938 aaKnown RBP eCLIP20.46■□□□□ 0.87
CD55-209ENST00000488171 EEF2KMTQ96G04 330 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 CCSER2Q9H7U1 834 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 CYP3A43Q9HB55 503 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 TMEM8AQ9HCN3 771 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 USP18Q9UMW8 372 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 SLC9A3R1O14745 358 aaPredicted RBP20.46■□□□□ 0.87
CD55-209ENST00000488171 ADORA2BP29275 332 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 TUBP50607 506 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 SYT13Q7L8C5 426 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.46■□□□□ 0.87
CD55-209ENST00000488171 CAMKK1Q8N5S9 505 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 FAM160A2Q8N612 972 aaPredicted RBP20.46■□□□□ 0.87
CD55-209ENST00000488171 ENGASEQ8NFI3 743 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 WHAMMQ8TF30 809 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 CCDC34Q96HJ3 373 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 HNRNPABQ99729 332 aaKnown RBP20.46■□□□□ 0.87
CD55-209ENST00000488171 NIF3L1Q9GZT8 377 aa20.46■□□□□ 0.87
CD55-209ENST00000488171 EML5Q05BV3 1969 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 ANTXRLA6NF34 631 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 HHLA1C9JL84 531 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 K7EQS6 105 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 CILPO75339 1184 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 FAM200BP0CF97 657 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 GTF2H1P32780 548 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 PRCPP42785 496 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 LMNB2Q03252 620 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 BECN1Q14457 450 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 KRT39Q6A163 491 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 RHBDF2Q6PJF5 856 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 CLEC20AQ6ZU45 233 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 CEP68Q76N32 757 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 GPRIN1Q7Z2K8 1008 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 GAB3Q8WWW8 586 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 SEMA4DQ92854 862 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 CYFIP2Q96F07 1278 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 HHIPQ96QV1 700 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 NT5C1AQ9BXI3 368 aa20.45■□□□□ 0.86
CD55-209ENST00000488171 DNAH14Q0VDD8 3507 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 E2F8A0AVK6 867 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 LRP3O75074 770 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 CD58P19256 250 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 MESP2Q0VG99 397 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 DMC1Q14565 340 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 DGLUCYQ7Z3D6 616 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 USP33Q8TEY7 942 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 WBP2Q969T9 261 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 FBXO44Q9H4M3 255 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 RMND1Q9NWS8 449 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 TBC1D14Q9P2M4 693 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 MYH10P35580 1976 aa20.44■□□□□ 0.86
CD55-209ENST00000488171 RPP40O75818 363 aaKnown RBP20.43■□□□□ 0.86
CD55-209ENST00000488171 SLC6A11P48066 632 aa20.43■□□□□ 0.86
CD55-209ENST00000488171 NUCB2P80303 420 aa20.43■□□□□ 0.86
CD55-209ENST00000488171 COBLL1Q53SF7 1204 aa20.43■□□□□ 0.86
CD55-209ENST00000488171 ZNF658Q5TYW1 1059 aaPredicted RBP20.43■□□□□ 0.86
CD55-209ENST00000488171 C12orf40Q86WS4 652 aa20.43■□□□□ 0.86
CD55-209ENST00000488171 SFTPA1Q8IWL2 248 aa20.43■□□□□ 0.86
CD55-209ENST00000488171 SPATA20Q8TB22 786 aa20.43■□□□□ 0.86
CD55-209ENST00000488171 ERCC4Q92889 916 aaPredicted RBP20.43■□□□□ 0.86
CD55-209ENST00000488171 ACDQ96AP0 544 aa20.43■□□□□ 0.86
CD55-209ENST00000488171 GSDMAQ96QA5 445 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms