RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 LINC01599Q8WXQ3 324 aa21.31■■□□□ 1
PHF1-209ENST00000487667 CENPIQ92674 756 aaPredicted RBP21.31■■□□□ 1
PHF1-209ENST00000487667 CCDC114Q96M63 670 aa21.31■■□□□ 1
PHF1-209ENST00000487667 KRT82Q9NSB4 513 aa21.31■■□□□ 1
PHF1-209ENST00000487667 PCSK1NQ9UHG2 260 aa21.31■■□□□ 1
PHF1-209ENST00000487667 PCDHB7Q9Y5E2 793 aa21.31■■□□□ 1
PHF1-209ENST00000487667 IBSPP21815 317 aaPredicted RBP21.3■■□□□ 1
PHF1-209ENST00000487667 MRPS5P82675 430 aaKnown RBP21.3■■□□□ 1
PHF1-209ENST00000487667 RNASELQ05823 741 aaKnown RBP21.3■■□□□ 1
PHF1-209ENST00000487667 BYSLQ13895 437 aaKnown RBP21.3■■□□□ 1
PHF1-209ENST00000487667 INTS6LQ5JSJ4 861 aaKnown RBP21.3■■□□□ 1
PHF1-209ENST00000487667 CFAP58Q5T655 872 aa21.3■■□□□ 1
PHF1-209ENST00000487667 KAZNQ674X7 775 aa21.3■■□□□ 1
PHF1-209ENST00000487667 OVOS1Q6IE37 1185 aa21.3■■□□□ 1
PHF1-209ENST00000487667 FAM171BQ6P995 826 aa21.3■■□□□ 1
PHF1-209ENST00000487667 DDX42Q86XP3 938 aaKnown RBP eCLIP21.3■■□□□ 1
PHF1-209ENST00000487667 NKD2Q969F2 451 aaPredicted RBP21.3■■□□□ 1
PHF1-209ENST00000487667 PCED1BQ96HM7 432 aa21.3■■□□□ 1
PHF1-209ENST00000487667 PIWIL1Q96J94 861 aaKnown RBP21.3■■□□□ 1
PHF1-209ENST00000487667 GDAP1L1Q96MZ0 367 aa21.3■■□□□ 1
PHF1-209ENST00000487667 PAAF1Q9BRP4 392 aa21.3■■□□□ 1
PHF1-209ENST00000487667 HERPUD2Q9BSE4 406 aa21.3■■□□□ 1
PHF1-209ENST00000487667 MAK16Q9BXY0 300 aaKnown RBP21.3■■□□□ 1
PHF1-209ENST00000487667 TRIM31Q9BZY9 425 aa21.3■■□□□ 1
PHF1-209ENST00000487667 PNPLA8Q9NP80 782 aa21.3■■□□□ 1
PHF1-209ENST00000487667 CNGB3Q9NQW8 809 aa21.3■■□□□ 1
PHF1-209ENST00000487667 KLHL11Q9NVR0 708 aa21.3■■□□□ 1
PHF1-209ENST00000487667 LIASO43766 372 aa21.29■■□□□ 1
PHF1-209ENST00000487667 DAB1O75553 588 aa21.29■■□□□ 1
PHF1-209ENST00000487667 GRAP2O75791 330 aa21.29■■□□□ 1
PHF1-209ENST00000487667 AP1G2O75843 785 aa21.29■■□□□ 1
PHF1-209ENST00000487667 GABBR2O75899 941 aa21.29■■□□□ 1
PHF1-209ENST00000487667 ENDOD1O94919 500 aa21.29■■□□□ 1
PHF1-209ENST00000487667 MATKP42679 507 aa21.29■■□□□ 1
PHF1-209ENST00000487667 KCNJ1P48048 391 aa21.29■■□□□ 1
PHF1-209ENST00000487667 SNX1Q13596 522 aa21.29■■□□□ 1
PHF1-209ENST00000487667 TRADDQ15628 312 aa21.29■■□□□ 1
PHF1-209ENST00000487667 PKN2Q16513 984 aaKnown RBP21.29■■□□□ 1
PHF1-209ENST00000487667 CLLU1OSQ5K130 101 aa21.29■■□□□ 1
PHF1-209ENST00000487667 ANKRD33Q7Z3H0 272 aa21.29■■□□□ 1
PHF1-209ENST00000487667 CFAP57Q96MR6 1250 aa21.29■■□□□ 1
PHF1-209ENST00000487667 TOX2Q96NM4 488 aa21.29■■□□□ 1
PHF1-209ENST00000487667 TRIM62Q9BVG3 475 aa21.29■■□□□ 1
PHF1-209ENST00000487667 PRDM16Q9HAZ2 1276 aa21.29■■□□□ 1
PHF1-209ENST00000487667 NGRNQ9NPE2 291 aaKnown RBP21.29■■□□□ 1
PHF1-209ENST00000487667 CACNG4Q9UBN1 327 aa21.29■■□□□ 1
PHF1-209ENST00000487667 STAP1Q9ULZ2 295 aa21.29■■□□□ 1
PHF1-209ENST00000487667 SNX24Q9Y343 169 aa21.29■■□□□ 1
PHF1-209ENST00000487667 FAM153BP0C7A2 387 aa21.29■■□□□ 1
PHF1-209ENST00000487667 KRT10P13645 584 aa21.29■■□□□ 1
PHF1-209ENST00000487667 YWHAZP63104 245 aaKnown RBP21.29■■□□□ 1
PHF1-209ENST00000487667 ADIGQ0VDE8 80 aa21.29■■□□□ 1
PHF1-209ENST00000487667 SMTNL2Q2TAL5 461 aa21.29■■□□□ 1
PHF1-209ENST00000487667 FAM153CQ494X1 144 aa21.29■■□□□ 1
PHF1-209ENST00000487667 KIAA0319Q5VV43 1072 aa21.29■■□□□ 1
PHF1-209ENST00000487667 TRNP1Q6NT89 227 aa21.29■■□□□ 1
PHF1-209ENST00000487667 CD300LGQ6UXG3 332 aa21.29■■□□□ 1
PHF1-209ENST00000487667 CEP128Q6ZU80 1094 aa21.29■■□□□ 1
PHF1-209ENST00000487667 PSTKQ8IV42 348 aaKnown RBP21.29■■□□□ 1
PHF1-209ENST00000487667 SNF8Q96H20 258 aa21.29■■□□□ 1
PHF1-209ENST00000487667 ZNF333Q96JL9 665 aa21.29■■□□□ 1
PHF1-209ENST00000487667 C11orf84Q9BUA3 381 aaPredicted RBP21.29■■□□□ 1
PHF1-209ENST00000487667 CSNK1G1Q9HCP0 422 aa21.29■■□□□ 1
PHF1-209ENST00000487667 ZDHHC18Q9NUE0 388 aa21.29■■□□□ 1
PHF1-209ENST00000487667 RRN3Q9NYV6 651 aa21.29■■□□□ 1
PHF1-209ENST00000487667 ASIC3Q9UHC3 531 aa21.29■■□□□ 1
PHF1-209ENST00000487667 FAM153AQ9UHL3 310 aa21.29■■□□□ 1
PHF1-209ENST00000487667 TIMM13Q9Y5L4 95 aaPredicted RBP21.29■■□□□ 1
PHF1-209ENST00000487667 MYBPHLA2RUH7 354 aa21.28■■□□□ 1
PHF1-209ENST00000487667 DCDC2CA8MYV0 355 aa21.28■■□□□ 1
PHF1-209ENST00000487667 ENPP3O14638 875 aa21.28■■□□□ 1
PHF1-209ENST00000487667 NBNO60934 754 aa21.28■■□□□ 1
PHF1-209ENST00000487667 ITGAVP06756 1048 aa21.28■■□□□ 1
PHF1-209ENST00000487667 NOS2P35228 1153 aa21.28■■□□□ 1
PHF1-209ENST00000487667 RPL21P46778 160 aaKnown RBP21.28■■□□□ 1
PHF1-209ENST00000487667 ATP11AP98196 1134 aa21.28■■□□□ 1
PHF1-209ENST00000487667 LLGL1Q15334 1064 aa21.28■■□□□ 1
PHF1-209ENST00000487667 C15orf59Q2T9L4 293 aaPredicted RBP21.28■■□□□ 1
PHF1-209ENST00000487667 KCNT1Q5JUK3 1230 aa21.28■■□□□ 1
PHF1-209ENST00000487667 C4orf50Q6ZRC1 276 aa21.28■■□□□ 1
PHF1-209ENST00000487667 COLGALT2Q8IYK4 626 aa21.28■■□□□ 1
PHF1-209ENST00000487667 SCML4Q8N228 414 aa21.28■■□□□ 1
PHF1-209ENST00000487667 DBF4BQ8NFT6 615 aa21.28■■□□□ 1
PHF1-209ENST00000487667 ATG4AQ8WYN0 398 aa21.28■■□□□ 1
PHF1-209ENST00000487667 HSPH1Q92598 858 aa21.28■■□□□ 1
PHF1-209ENST00000487667 MRPL9Q9BYD2 267 aaKnown RBP21.28■■□□□ 1
PHF1-209ENST00000487667 TBC1D13Q9NVG8 400 aa21.28■■□□□ 1
PHF1-209ENST00000487667 LRFN2Q9ULH4 789 aa21.28■■□□□ 1
PHF1-209ENST00000487667 R3HDM2Q9Y2K5 976 aaKnown RBP21.28■■□□□ 1
PHF1-209ENST00000487667 BRCA2P51587 3418 aa21.28■■□□□ 1
PHF1-209ENST00000487667 CLDN5O00501 218 aa21.27■■□□□ 1
PHF1-209ENST00000487667 RDXP35241 583 aaKnown RBP21.27■■□□□ 1
PHF1-209ENST00000487667 BRCC3P46736 316 aa21.27■■□□□ 1
PHF1-209ENST00000487667 PLTPP55058 493 aa21.27■■□□□ 1
PHF1-209ENST00000487667 VCPP55072 806 aaKnown RBP21.27■■□□□ 1
PHF1-209ENST00000487667 CDH6P55285 790 aa21.27■■□□□ 1
PHF1-209ENST00000487667 MAP3K7CLP57077 242 aa21.27■■□□□ 1
PHF1-209ENST00000487667 YWHAHQ04917 246 aaPredicted RBP21.27■■□□□ 1
PHF1-209ENST00000487667 KRT81Q14533 505 aa21.27■■□□□ 1
PHF1-209ENST00000487667 SLMAPQ14BN4 828 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms