RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 NUMBLQ9Y6R0 609 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 A0A1W2PQH9 124 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 ZNF840PA6NDX5 716 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 LOC730098B7Z3J9 87 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 E5RJQ4 531 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 CHRNB2P17787 502 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 PLA2G4AP47712 749 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 SLC8A3P57103 927 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 ZXDBP98169 803 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 CYP26C1Q6V0L0 522 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 OTOP3Q7RTS5 596 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 PHLDB2Q86SQ0 1253 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 CPA5Q8WXQ8 436 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 ACSF2Q96CM8 615 aaPredicted RBP12.51□□□□□ -0.41
APTX-227ENST00000485479 TRMT2BQ96GJ1 504 aaKnown RBP12.51□□□□□ -0.41
APTX-227ENST00000485479 SLITRK1Q96PX8 696 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 GCNAQ96QF7 691 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 TTLL2Q9BWV7 592 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 RNF38Q9H0F5 515 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 LRRC4Q9HBW1 653 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
APTX-227ENST00000485479 MUTYHQ9UIF7 546 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 KIAA1257Q9ULG3 409 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 WDFY4Q6ZS81 3184 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
APTX-227ENST00000485479 ZNF197O14709 1029 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 MED7O43513 233 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 PLEKP08567 350 aaPredicted RBP12.5□□□□□ -0.41
APTX-227ENST00000485479 CDC25CP30307 473 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 FMO1Q01740 532 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 PDCLQ13371 301 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 GRM2Q14416 872 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 TANGO2Q6ICL3 276 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 ARID3BQ8IVW6 561 aaPredicted RBP12.5□□□□□ -0.41
APTX-227ENST00000485479 VSTM4Q8IW00 320 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 SCUBE3Q8IX30 993 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 GJD3Q8N144 294 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 SLC30A5Q8TAD4 765 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 MRPS31Q92665 395 aaKnown RBP12.5□□□□□ -0.41
APTX-227ENST00000485479 PCDHB18PQ96TA0 734 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 NAGPAQ9UK23 515 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 TTC28Q96AY4 2481 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 YJEFN3A6XGL0 299 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 E7ENQ6 273 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 CBFA2T2O43439 604 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 NARSO43776 548 aaKnown RBP12.5□□□□□ -0.41
APTX-227ENST00000485479 GRAP2O75791 330 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 RTN3O95197 1032 aaPredicted RBP12.5□□□□□ -0.41
APTX-227ENST00000485479 CKMP06732 381 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 TPM3P06753 285 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 FCARP24071 287 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 ADKP55263 362 aaKnown RBP12.5□□□□□ -0.41
APTX-227ENST00000485479 TAF5Q15542 800 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 RAB41Q5JT25 222 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 NAA35Q5VZE5 725 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 SPECC1LQ69YQ0 1117 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 BHLHA9Q7RTU4 235 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 SIX6OS1Q8N1H7 587 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 EDEM1Q92611 657 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 ASB16Q96NS5 453 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 LRRC3BQ96PB8 259 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
APTX-227ENST00000485479 UXTQ9UBK9 157 aaPredicted RBP12.5□□□□□ -0.41
APTX-227ENST00000485479 TMCO5BA8MYB1 307 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 ERBB2P04626 1255 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
APTX-227ENST00000485479 ARHGAP15Q53QZ3 475 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 SARM1Q6SZW1 724 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 RNF135Q8IUD6 432 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 CMTM8Q8IZV2 173 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 LEMD2Q8NC56 503 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
APTX-227ENST00000485479 HAUS4Q9H6D7 363 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 PNPLA8Q9NP80 782 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 AVENQ9NQS1 362 aaPredicted RBP12.49□□□□□ -0.41
APTX-227ENST00000485479 PCDHGC3Q9UN70 934 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 USTQ9Y2C2 406 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 USP3Q9Y6I4 520 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 COCHO43405 550 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 ZBED1O96006 694 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 AVPR1AP37288 418 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 ZNF75DP51815 510 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 CDR2Q01850 454 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 HTR4Q13639 388 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 STILQ15468 1287 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 ASIC2Q16515 512 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 OLIG1Q8TAK6 271 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 FBXO44Q9H4M3 255 aa12.49□□□□□ -0.41
APTX-227ENST00000485479 TASP1Q9H6P5 420 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms