RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TYRO3Q06418 890 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 STILQ15468 1287 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 KLHL40Q2TBA0 621 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 PKDCCQ504Y2 493 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 RAB41Q5JT25 222 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 DPY19L2P1Q6NXN4 242 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 LCLAT1Q6UWP7 414 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 CCDC186Q7Z3E2 898 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 RBBP8NLQ8NC74 664 aaPredicted RBP19■□□□□ 0.63
HDAC6-225ENST00000483506 FLCNQ8NFG4 579 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 TFAP2BQ92481 460 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 OSBPL6Q9BZF3 934 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 RNF38Q9H0F5 515 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 SIX2Q9NPC8 291 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 UBE2TQ9NPD8 197 aaPredicted RBP19■□□□□ 0.63
HDAC6-225ENST00000483506 GMIPQ9P107 970 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 WDFY4Q6ZS81 3184 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 KANSL1LA0AUZ9 987 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 XPO1O14980 1071 aaKnown RBP18.99■□□□□ 0.63
HDAC6-225ENST00000483506 CD19P15391 556 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 SLC8A3P57103 927 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 ZXDBP98169 803 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 MYL5Q02045 173 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 BST2Q10589 180 aaKnown RBP18.99■□□□□ 0.63
HDAC6-225ENST00000483506 MTF1Q14872 753 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 GOLGA7BQ2TAP0 167 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 HSP90AA4PQ58FG1 418 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 HECTD3Q5T447 861 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 CAVIN1Q6NZI2 390 aaKnown RBP18.99■□□□□ 0.63
HDAC6-225ENST00000483506 TPRG1Q6ZUI0 275 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 PIGZQ86VD9 579 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 PJA1Q8NG27 643 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 ZFYVE19Q96K21 471 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 ZSWIM1Q9BR11 485 aa18.99■□□□□ 0.63
HDAC6-225ENST00000483506 TLR8Q9NR97 1041 aaKnown RBP18.99■□□□□ 0.63
HDAC6-225ENST00000483506 CHORDC1Q9UHD1 332 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-225ENST00000483506 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.99■□□□□ 0.63
HDAC6-225ENST00000483506 MIA3Q5JRA6 1907 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 CYP26A1O43174 497 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 PI15O43692 258 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 SETSIPP0DME0 302 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 PTMSP20962 102 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 PLA2G4AP47712 749 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 PGFP49763 221 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 MFAP3P55082 362 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 CNGA2Q16280 664 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 MEA1Q16626 185 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 C1orf228Q6PIY5 440 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 ZNF687Q8N1G0 1237 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 ZNF276Q8N554 614 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 CSGALNACT1Q8TDX6 532 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 SH3RF2Q8TEC5 729 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 SHC3Q92529 594 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 PRRX2Q99811 253 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 C8orf33Q9H7E9 229 aaPredicted RBP18.98■□□□□ 0.63
HDAC6-225ENST00000483506 LTB4R2Q9NPC1 389 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 CYLDQ9NQC7 956 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 DLGAP2Q9P1A6 1054 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 HESX1Q9UBX0 185 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 PIAS3Q9Y6X2 628 aa18.98■□□□□ 0.63
HDAC6-225ENST00000483506 MAN2B1O00754 1011 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 COCHO43405 550 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 ABL1P00519 1130 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 PSEN1P49768 467 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 APBA1Q02410 837 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 PDE4CQ08493 712 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 NCAPHQ15003 741 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 PDGFRLQ15198 375 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 GJB7Q6PEY0 223 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 ZNF852Q6ZMS4 543 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 DDX42Q86XP3 938 aaKnown RBP eCLIP18.97■□□□□ 0.63
HDAC6-225ENST00000483506 CCDC105Q8IYK2 499 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 OSCP1Q8WVF1 389 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 KCTD13Q8WZ19 329 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 ZFRQ96KR1 1074 aaKnown RBP18.97■□□□□ 0.63
HDAC6-225ENST00000483506 NELL2Q99435 816 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 BPIFA3Q9BQP9 254 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 FOXQ1Q9C009 403 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 CCSER2Q9H7U1 834 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 HPS4Q9NQG7 708 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 GKN1Q9NS71 199 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 FANCLQ9NW38 375 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 SIT1Q9Y3P8 196 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 CACNA1HO95180 2353 aa18.97■□□□□ 0.63
HDAC6-225ENST00000483506 BECN2A8MW95 431 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 LEFTY2O00292 366 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 ZNF18P17022 549 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 BRD2P25440 801 aaKnown RBP18.96■□□□□ 0.63
HDAC6-225ENST00000483506 TNK2Q07912 1038 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 KCNMA1Q12791 1236 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 KRT31Q15323 416 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 ITPRIPL2Q3MIP1 535 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 PM20D1Q6GTS8 502 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 CC2D1AQ6P1N0 951 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-225ENST00000483506 KLHDC10Q6PID8 442 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 RALGPS2Q86X27 583 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-225ENST00000483506 SCML4Q8N228 414 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 SLC35F5Q8WV83 523 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 FUCA2Q9BTY2 467 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 HSD3B7Q9H2F3 369 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms