RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 MCM7P33993 719 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 RFC1P35251 1148 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CHRNA4P43681 627 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 SLC6A11P48066 632 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 RRP1P56182 461 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 ATP8B2P98198 1209 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CYP27A1Q02318 531 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 MYO1EQ12965 1108 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 GAS6Q14393 721 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 OASLQ15646 514 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 RSPO4Q2I0M5 234 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 ALG11Q2TAA5 492 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 TBRG1Q3YBR2 411 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 TRIM60Q495X7 471 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 AMOTQ4VCS5 1084 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 ERMARDQ5T6L9 678 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 TTC22Q5TAA0 569 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 RINT1Q6NUQ1 792 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 IRGCQ6NXR0 463 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 SHQ1Q6PI26 577 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 C20orf204Q6ZNR8 217 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 MSANTD1Q6ZTZ1 278 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 KIAA0408Q6ZU52 694 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 USP49Q70CQ1 688 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 PIWIL3Q7Z3Z3 882 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 PPP1R3BQ86XI6 285 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 IRF2BP1Q8IU81 584 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CCDC28AQ8IWP9 274 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 HDDC3Q8N4P3 179 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 ZNF540Q8NDQ6 660 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 OR2I1PQ8NGU4 316 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 IFI44Q8TCB0 444 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CFHR4Q92496 578 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 MAML1Q92585 1016 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 KRT35Q92764 455 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CCDC114Q96M63 670 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 AK8Q96MA6 479 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 DMRTA2Q96SC8 542 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 MRPL1Q9BYD6 325 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 INTS2Q9H0H0 1204 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 SIK2Q9H0K1 926 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CHMP4BQ9H444 224 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 ACSS3Q9H6R3 686 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 BRF2Q9HAW0 419 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 LANCL2Q9NS86 450 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 SIRT3Q9NTG7 399 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 LPAR3Q9UBY5 353 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 MID2Q9UJV3 735 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 DAPP1Q9UN19 280 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 PPIEQ9UNP9 301 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 MYBBP1AQ9BQG0 1328 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 A0A1W2PQ09 198 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 SHISA3A0PJX4 238 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 LRRD1A4D1F6 860 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 CCDC169A6NNP5 214 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 TM4SF5O14894 197 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 CASQ2O14958 399 aaPredicted RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 SLC27A2O14975 620 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 ZNF263O14978 683 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 MCF2LO15068 1137 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 MUSKO15146 869 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 HNRNPCL1O60812 293 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 SEC14L2O76054 403 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 KIF20AO95235 890 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 LARGE1O95461 756 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 IL1R1P14778 569 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 TPH1P17752 444 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 TFEBP19484 476 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 RAB6AP20340 208 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 AMPHP49418 695 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 NT5C2P49902 561 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 EIF3BP55884 814 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 EIF4A1P60842 406 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 MGAT5Q09328 741 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 CTBP1Q13363 440 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 LASP1Q14847 261 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 TMTC4Q5T4D3 741 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 DGAT2L7PQ6IED9 249 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 WDR73Q6P4I2 378 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 UNQ6494/PRO21346Q6UXR6 183 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 ACAD11Q709F0 780 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 UBE3BQ7Z3V4 1068 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 BMP8AQ7Z5Y6 402 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 CABP7Q86V35 215 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 MFSD4AQ8N468 514 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 FRMD1Q8N878 549 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 FSIP1Q8NA03 581 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 TDRD5Q8NAT2 981 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 C2CD4AQ8NCU7 369 aaPredicted RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 KIF18AQ8NI77 898 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 SPATA20Q8TB22 786 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 CPT1CQ8TCG5 803 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 KCNG4Q8TDN1 519 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 PRPF31Q8WWY3 499 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 STAMQ92783 540 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 ARHGEF2Q92974 986 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 GRAMD1AQ96CP6 724 aa5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 TOE1Q96GM8 510 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-216ENST00000483065 FAM118BQ9BPY3 351 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms