RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 RBAKQ9NYW8 714 aaPredicted RBP21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 TBC1D14Q9P2M4 693 aa21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 PCDHB9Q9Y5E1 797 aa21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 TRIM66O15016 1216 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 HOXC11O43248 304 aaPredicted RBP21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 ZNF217O75362 1048 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 KRT19P08727 400 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 RBP5P82980 135 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 LY6G5CQ5SRR4 150 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 DPH6Q7L8W6 267 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 GLRX5Q86SX6 157 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 SFR1Q86XK3 245 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 TRIML1Q8N9V2 468 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 ZSWIM2Q8NEG5 633 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 MDM1Q8TC05 714 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 OTUB2Q96DC9 234 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 SAAL1Q96ER3 474 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 STRA6Q9BX79 667 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 MTMR12Q9C0I1 747 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 FAM124BQ9H5Z6 455 aaPredicted RBP21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 SUSD2Q9UGT4 822 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 APOBEC2Q9Y235 224 aaKnown RBP21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 PLXNB3Q9ULL4 1909 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 KALRNO60229 2985 aa21.6■■□□□ 1.05
PDLIM1-202ENST00000477757 MYOFQ9NZM1 2061 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 A0A1W2PQF6 199 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 E2F8A0AVK6 867 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 TBC1D3BA6NDS4 549 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 LMO2P25791 158 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 CYP27A1Q02318 531 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 GAD2Q05329 585 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 PLEKHG6Q3KR16 790 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 PREPLQ4J6C6 727 aaPredicted RBP21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 MCTP1Q6DN14 999 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 TERB1Q8NA31 727 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 LARP4BQ92615 738 aaKnown RBP21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 PCED1BQ96HM7 432 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 C8orf48Q96LL4 319 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 CD248Q9HCU0 757 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 HCN2Q9UL51 889 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 RAXQ9Y2V3 346 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 BPTFQ12830 3046 aa21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 MYO18AQ92614 2054 aaKnown RBP21.59■■□□□ 1.05
PDLIM1-202ENST00000477757 F8VP50 259 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 TULP3O75386 442 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 MBL2P11226 248 aaPredicted RBP21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 NDUFV2P19404 249 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 NTSR1P30989 418 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 KCNA1Q09470 495 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 MYO1EQ12965 1108 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 C10orf76Q5T2E6 689 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 BTBD8Q5XKL5 378 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 KRI1Q8N9T8 703 aaKnown RBP21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 ZFRQ96KR1 1074 aaKnown RBP21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 DEC1Q9P2X7 70 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 DKK4Q9UBT3 224 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 CYP8B1Q9UNU6 501 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 EXOC7Q9UPT5 735 aa21.58■■□□□ 1.05
PDLIM1-202ENST00000477757 TULP1O00294 542 aaPredicted RBP21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 CBFA2T3O75081 653 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 LDHAP00338 332 aaKnown RBP21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 ABL1P00519 1130 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 TMEM191BP0C7N4 346 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 WARSP23381 471 aaKnown RBP21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 DDIT3P35638 169 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 TAF10Q12962 218 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 GRIK2Q13002 908 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 TOGARAM2Q6ZUX3 1019 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 MIB1Q86YT6 1006 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 RASSF8Q8NHQ8 419 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 MYCBPAPQ8TBZ2 947 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 HNRNPLLQ8WVV9 542 aaKnown RBP21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 ZNF419Q96HQ0 510 aaPredicted RBP21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 SLITRK1Q96PX8 696 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 DUSP9Q99956 384 aaKnown RBP21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 ZDHHC5Q9C0B5 715 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 STARD13Q9Y3M8 1113 aa21.57■■□□□ 1.04
PDLIM1-202ENST00000477757 ZBTB24O43167 697 aaPredicted RBP21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 GARTP22102 1010 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 L1TD1Q5T7N2 865 aaKnown RBP21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 TDRD10Q5VZ19 366 aaKnown RBP21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 NUDT18Q6ZVK8 323 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 NAT16Q8N8M0 369 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 HPDLQ96IR7 371 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 PDE11AQ9HCR9 933 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 SEL1LQ9UBV2 794 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 PCOLCE2Q9UKZ9 415 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 KIF3AQ9Y496 699 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 PTPRBP23467 1997 aa21.56■■□□□ 1.04
PDLIM1-202ENST00000477757 GNSP15586 552 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 WASP42768 502 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 SYCP2LQ5T4T6 812 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 EGFLAMQ63HQ2 1017 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 SLCO6A1Q86UG4 719 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 RGL4Q8IZJ4 473 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 IPO4Q8TEX9 1081 aaKnown RBP21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 LRIG1Q96JA1 1093 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 ACCSQ96QU6 501 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 TMEM30AQ9NV96 361 aa21.55■■□□□ 1.04
PDLIM1-202ENST00000477757 PTPRJQ12913 1337 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms