RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 PNKPQ96T60 521 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 REEP2Q9BRK0 252 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 LINC00597Q9H2U6 94 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 ZHX3Q9H4I2 956 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 LARSQ9P2J5 1176 aaKnown RBP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 ARHGAP28Q9P2N2 729 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 ODF2LQ9ULJ1 636 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 CYP8B1Q9UNU6 501 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 MORC2Q9Y6X9 1032 aaPredicted RBP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 CEP192Q8TEP8 1941 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 K7ENM7 598 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
TRAIP-206ENST00000477546 USP17L7P0C7H9 530 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 KRT10P13645 584 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 TCF3P15923 654 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 HMGA1P17096 107 aaKnown RBP11.16□□□□□ -0.62
TRAIP-206ENST00000477546 STAT6P42226 847 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 SMTNP53814 917 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 BNC1Q01954 994 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 MESP2Q0VG99 397 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 STRN3Q13033 797 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 TARDBPQ13148 414 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAIP-206ENST00000477546 UBAP2LQ14157 1087 aaKnown RBP11.16□□□□□ -0.62
TRAIP-206ENST00000477546 BECN1Q14457 450 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 ZNF568Q3ZCX4 644 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 ARSHQ5FYA8 562 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 RRAGBQ5VZM2 374 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 OVOS1Q6IE37 1185 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 TRMT11Q7Z4G4 463 aaKnown RBP11.16□□□□□ -0.62
TRAIP-206ENST00000477546 ZNF248Q8NDW4 579 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 MRPL4Q9BYD3 311 aaKnown RBP11.16□□□□□ -0.62
TRAIP-206ENST00000477546 ZDHHC4Q9NPG8 344 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 GMIPQ9P107 970 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 SRPK3Q9UPE1 567 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 TNFSF13BQ9Y275 285 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 PAXBP1Q9Y5B6 917 aa11.16□□□□□ -0.62
TRAIP-206ENST00000477546 MEI4A8MW99 385 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 H0YCG3 227 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 BCAT2O15382 392 aaPredicted RBP11.15□□□□□ -0.62
TRAIP-206ENST00000477546 PPP6R2O75170 966 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 CYP17A1P05093 508 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 CKMP06732 381 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 HARSP12081 509 aaKnown RBP11.15□□□□□ -0.62
TRAIP-206ENST00000477546 TYMPP19971 482 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 GRIA2P42262 883 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 TNFRSF4P43489 277 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 CLDN6P56747 220 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 RIPPLY3P57055 190 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 OSTNP61366 133 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 NFATC3Q12968 1075 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 NT5DC1Q5TFE4 455 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 ATG14Q6ZNE5 492 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 TAS1R3Q7RTX0 852 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 MYCT1Q8N699 235 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 PDILTQ8N807 584 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 TMEM161BQ8NDZ6 487 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 SH3RF2Q8TEC5 729 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 BICD1Q96G01 975 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.62
TRAIP-206ENST00000477546 CDT1Q9H211 546 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 TMEM134Q9H6X4 195 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 PARVGQ9HBI0 331 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 FTSJ1Q9UET6 329 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 KCNG1Q9UIX4 513 aa11.15□□□□□ -0.62
TRAIP-206ENST00000477546 LRRK2Q5S007 2527 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 TRIP11Q15643 1979 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 TRAV19A0A0A6YYK7 116 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 PCDHGA12O60330 932 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 CUTAO60888 179 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 TADA3O75528 432 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 MAPTP10636 758 aaKnown RBP11.14□□□□□ -0.63
TRAIP-206ENST00000477546 HOXB2P14652 356 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 NDUFV2P19404 249 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 CR2P20023 1033 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 DDIT3P35638 169 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 ME1P48163 572 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 PCBP4P57723 403 aaKnown RBP11.14□□□□□ -0.63
TRAIP-206ENST00000477546 DNM1Q05193 864 aaKnown RBP11.14□□□□□ -0.63
TRAIP-206ENST00000477546 VAC14Q08AM6 782 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 INAVAQ3KP66 663 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 SLC39A12Q504Y0 691 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 HES3Q5TGS1 186 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 DYMQ7RTS9 669 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 OR10T2Q8NGX3 314 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 C2orf15Q8WU43 125 aaKnown RBP11.14□□□□□ -0.63
TRAIP-206ENST00000477546 SLC22A12Q96S37 553 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 ACO2Q99798 780 aaKnown RBP11.14□□□□□ -0.63
TRAIP-206ENST00000477546 TCHPQ9BT92 498 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 PANK2Q9BZ23 570 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 MIR1-1HGQ9H1L0 117 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 TRPC7Q9HCX4 862 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 ARHGEF4Q9NR80 690 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
TRAIP-206ENST00000477546 CITO14578 2027 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms