RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 NIPA2Q8N8Q9 360 aa20.79■□□□□ 0.92
CLK2-205ENST00000476983 SCAMP5Q8TAC9 235 aa20.79■□□□□ 0.92
CLK2-205ENST00000476983 FNIP1Q8TF40 1166 aa20.79■□□□□ 0.92
CLK2-205ENST00000476983 RNPC3Q96LT9 517 aaKnown RBP20.79■□□□□ 0.92
CLK2-205ENST00000476983 SEPT5Q99719 369 aaPredicted RBP20.79■□□□□ 0.92
CLK2-205ENST00000476983 CLSTN3Q9BQT9 956 aa20.79■□□□□ 0.92
CLK2-205ENST00000476983 TUBB2BQ9BVA1 445 aa20.79■□□□□ 0.92
CLK2-205ENST00000476983 OXCT2Q9BYC2 517 aaPredicted RBP20.79■□□□□ 0.92
CLK2-205ENST00000476983 RAB6CQ9H0N0 254 aa20.79■□□□□ 0.92
CLK2-205ENST00000476983 NR2E3Q9Y5X4 410 aa20.79■□□□□ 0.92
CLK2-205ENST00000476983 MYO16Q9Y6X6 1858 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 PDE2AO00408 941 aaPredicted RBP20.78■□□□□ 0.92
CLK2-205ENST00000476983 CEP104O60308 925 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 FBXO21O94952 628 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 SLU7O95391 586 aaKnown RBP20.78■□□□□ 0.92
CLK2-205ENST00000476983 CTNNB1P35222 781 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 ZNF143P52747 638 aaPredicted RBP20.78■□□□□ 0.92
CLK2-205ENST00000476983 SLC5A3P53794 718 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 ATP11AP98196 1134 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 KRT17Q04695 432 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 SHHQ15465 462 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 MGAT5BQ3V5L5 792 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 EFHC1Q5JVL4 640 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 SLC8B1Q6J4K2 584 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 AADACL2Q6P093 401 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 SPRED2Q7Z698 418 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 GPR152Q8TDT2 470 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 LCMT1Q9UIC8 334 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 PCDHA3Q9Y5H8 950 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 GBF1Q92538 1859 aa20.78■□□□□ 0.92
CLK2-205ENST00000476983 CCDC66A2RUB6 948 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 ZBED1O96006 694 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 SCNN1AP37088 669 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 PEX5P50542 639 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 DUSP4Q13115 394 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 CCDC14Q49A88 953 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 CCDC181Q5TID7 509 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 VSTM1Q6UX27 236 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 ARFGAP1Q8N6T3 406 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 MNS1Q8NEH6 495 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 SPPL2BQ8TCT7 592 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 PBKQ96KB5 322 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 PNPLA8Q9NP80 782 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 CNGB3Q9NQW8 809 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 YJEFN3A6XGL0 299 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 E7ENQ6 273 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 TRIM66O15016 1216 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 LRCH4O75427 683 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 ARHGEF15O94989 841 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 TFE3P19532 575 aaPredicted RBP20.77■□□□□ 0.92
CLK2-205ENST00000476983 SDC4P31431 198 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 RHOT1Q8IXI2 618 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 DEFB106AQ8N104 65 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 CNPY3Q9BT09 278 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 KLHL11Q9NVR0 708 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 ASNSD1Q9NWL6 643 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 MTUS1Q9ULD2 1270 aa20.77■□□□□ 0.92
CLK2-205ENST00000476983 LINC01553A4QN01 128 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 DPYSL4O14531 572 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 TNFRSF10BO14763 440 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 HSF2BPO75031 334 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 DAB1O75553 588 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 MAGEA11P43364 429 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 TXNRD3NBQ6F5E7 133 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 C8orf48Q96LL4 319 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 C17orf80Q9BSJ5 609 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 ZBP1Q9H171 429 aa20.76■□□□□ 0.91
CLK2-205ENST00000476983 MRPL17Q9NRX2 175 aaKnown RBP20.76■□□□□ 0.91
CLK2-205ENST00000476983 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.76■□□□□ 0.91
CLK2-205ENST00000476983 PSTPIP1O43586 416 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 HAPLN1P10915 354 aaPredicted RBP20.75■□□□□ 0.91
CLK2-205ENST00000476983 RWDD2BP57060 319 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 YWHAZP63104 245 aaKnown RBP20.75■□□□□ 0.91
CLK2-205ENST00000476983 SMARCB1Q12824 385 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 ATP13A4Q4VNC1 1196 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 BHLHA9Q7RTU4 235 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 CEP112Q8N8E3 955 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 ACSF2Q96CM8 615 aaPredicted RBP20.75■□□□□ 0.91
CLK2-205ENST00000476983 ZWILCHQ9H900 591 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 ALG13Q9NP73 1137 aaKnown RBP20.75■□□□□ 0.91
CLK2-205ENST00000476983 NGRNQ9NPE2 291 aaKnown RBP20.75■□□□□ 0.91
CLK2-205ENST00000476983 PCSK1NQ9UHG2 260 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 RNF8O76064 485 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 PYGMP11217 842 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 BMPR1AP36894 532 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 CKAP4Q07065 602 aaKnown RBP20.75■□□□□ 0.91
CLK2-205ENST00000476983 DCAF6Q58WW2 860 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 ZFYVE27Q5T4F4 411 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 TNS4Q8IZW8 715 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 C2orf15Q8WU43 125 aaKnown RBP20.75■□□□□ 0.91
CLK2-205ENST00000476983 FAM172AQ8WUF8 416 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 ADAM33Q9BZ11 813 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 CARD9Q9H257 536 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 USP3Q9Y6I4 520 aa20.75■□□□□ 0.91
CLK2-205ENST00000476983 LTFP02788 710 aa20.74■□□□□ 0.91
CLK2-205ENST00000476983 IL1R2P27930 398 aa20.74■□□□□ 0.91
CLK2-205ENST00000476983 MIPP30301 263 aa20.74■□□□□ 0.91
CLK2-205ENST00000476983 SULT1E1P49888 294 aa20.74■□□□□ 0.91
CLK2-205ENST00000476983 SLC25A11Q02978 314 aaKnown RBP20.74■□□□□ 0.91
CLK2-205ENST00000476983 LLGL1Q15334 1064 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms