RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TIGD1Q96MW7 591 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 TWNKQ96RR1 684 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 HNRNPABQ99729 332 aaKnown RBP11.44□□□□□ -0.58
SEC13-214ENST00000476597 NT5C1AQ9BXI3 368 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 IMPG2Q9BZV3 1241 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.44□□□□□ -0.58
SEC13-214ENST00000476597 SMPD4Q9NXE4 827 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 PCDHA5Q9Y5H7 936 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 NUP210Q8TEM1 1887 aaPredicted RBP11.44□□□□□ -0.58
SEC13-214ENST00000476597 CCDC163A0A0D9SF12 145 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 SLC9A3R1O14745 358 aaPredicted RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 COCHO43405 550 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 CILPO75339 1184 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 SMC2O95347 1197 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 MBL2P11226 248 aaPredicted RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 OPRD1P41143 372 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 TUBP50607 506 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 MAP3K7CLP57077 242 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 SRSF5Q13243 272 aaKnown RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 SIM2Q14190 667 aaPredicted RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 HEATR6Q6AI08 1181 aaKnown RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 LAIR1Q6GTX8 287 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 RHBDF2Q6PJF5 856 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 CLEC20AQ6ZU45 233 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 DDX42Q86XP3 938 aaKnown RBP eCLIP11.43□□□□□ -0.58
SEC13-214ENST00000476597 ZC3H3Q8IXZ2 948 aaKnown RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 ELOA2Q8IYF1 753 aaPredicted RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 CCDC150Q8NCX0 1101 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 SEMA4DQ92854 862 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 SECISBP2LQ93073 1101 aaKnown RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 RMDN1Q96DB5 314 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 CYFIP2Q96F07 1278 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 EEF2KMTQ96G04 330 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 ZFRQ96KR1 1074 aaKnown RBP11.43□□□□□ -0.58
SEC13-214ENST00000476597 NIF3L1Q9GZT8 377 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 FBXO44Q9H4M3 255 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 MMRN2Q9H8L6 949 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 KRT82Q9NSB4 513 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 RAB20Q9NX57 234 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 GMIPQ9P107 970 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 CFAP97Q9P2B7 532 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 SLC8A2Q9UPR5 921 aa11.43□□□□□ -0.58
SEC13-214ENST00000476597 PATJQ8NI35 1801 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 FANCMQ8IYD8 2048 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 E2F8A0AVK6 867 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 HHLA1C9JL84 531 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 STX10O60499 249 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 RETP07949 1114 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 FAM200BP0CF97 657 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 EPB41P11171 864 aaKnown RBP11.42□□□□□ -0.58
SEC13-214ENST00000476597 TRIM21P19474 475 aaKnown RBP11.42□□□□□ -0.58
SEC13-214ENST00000476597 ADORA2BP29275 332 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 PGFP49763 221 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 FKBP3Q00688 224 aaKnown RBP11.42□□□□□ -0.58
SEC13-214ENST00000476597 FOXK2Q01167 660 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 DHCR24Q15392 516 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 LPAL2Q16609 132 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 ANKRD40Q6AI12 368 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 PRR23BQ6ZRT6 265 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 CAMKK1Q8N5S9 505 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 FBXL13Q8NEE6 735 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 CCDC26Q8TAB7 109 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 ERCC4Q92889 916 aaPredicted RBP11.42□□□□□ -0.58
SEC13-214ENST00000476597 DUSP9Q99956 384 aaKnown RBP11.42□□□□□ -0.58
SEC13-214ENST00000476597 GTPBP4Q9BZE4 634 aaKnown RBP11.42□□□□□ -0.58
SEC13-214ENST00000476597 CCSER2Q9H7U1 834 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 FAM49BQ9NUQ9 324 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 POLR3BQ9NW08 1133 aaPredicted RBP11.42□□□□□ -0.58
SEC13-214ENST00000476597 TBC1D14Q9P2M4 693 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 GMEB2Q9UKD1 530 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 RAB23Q9ULC3 237 aa11.42□□□□□ -0.58
SEC13-214ENST00000476597 A0A0A0MRY4 1105 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 K7EQS6 105 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 SLC16A3O15427 465 aaKnown RBP11.41□□□□□ -0.58
SEC13-214ENST00000476597 CYP17A1P05093 508 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 CD58P19256 250 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 PXNP49023 591 aaPredicted RBP11.41□□□□□ -0.58
SEC13-214ENST00000476597 MXI1P50539 228 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 PMS1P54277 932 aaKnown RBP11.41□□□□□ -0.58
SEC13-214ENST00000476597 SYT13Q7L8C5 426 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 ERMP1Q7Z2K6 904 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 GPRIN1Q7Z2K8 1008 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 TTC39CQ8N584 583 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 RPLP0P6Q8NHW5 317 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 TATDN2Q93075 761 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 SMARCE1Q969G3 411 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 OTUB2Q96DC9 234 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 TSG101Q99816 390 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 PNPLA8Q9NP80 782 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 PARD6AQ9NPB6 346 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 DLL3Q9NYJ7 618 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 HOOK1Q9UJC3 728 aaKnown RBP11.41□□□□□ -0.58
SEC13-214ENST00000476597 SCML2Q9UQR0 700 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 COQ4Q9Y3A0 265 aa11.41□□□□□ -0.58
SEC13-214ENST00000476597 PRR5-ARHGAP8B1AHC4 643 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 SCAMP3O14828 347 aaKnown RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 TLR5O60602 858 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 LRP3O75074 770 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 TBX18O95935 607 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms