RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CLEC20AQ6ZU45 233 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 SYNPOQ8N3V7 929 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 SPEM1Q8N4L4 309 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 TRIML1Q8N9V2 468 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 TMEM176AQ96HP8 235 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 DUSP16Q9BY84 665 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 ECT2Q9H8V3 914 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 PRMT8Q9NR22 394 aaPredicted RBP11.83□□□□□ -0.52
CKS1B-206ENST00000474215 RBM12Q9NTZ6 932 aaKnown RBP11.83□□□□□ -0.52
CKS1B-206ENST00000474215 SMPD4Q9NXE4 827 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 GMIPQ9P107 970 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 CTNND2Q9UQB3 1225 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 CPQQ9Y646 472 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 PTPRDP23468 1912 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 GREB1Q4ZG55 1949 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 MIA3Q5JRA6 1907 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 HHLA1C9JL84 531 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 PMM2O15305 246 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 COCHO43405 550 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 GNA14O95837 355 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
CKS1B-206ENST00000474215 GJA4P35212 333 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 CXCL12P48061 93 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 FMO5P49326 533 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 TUBP50607 506 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 GALK1P51570 392 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 CCR3P51677 355 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 RAD23BP54727 409 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 STX17P56962 302 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
CKS1B-206ENST00000474215 PAK1Q13153 545 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 CUL2Q13617 745 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 GAS6Q14393 721 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 PPP2R5DQ14738 602 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 TMEM196Q5HYL7 178 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 PPP1R26Q5T8A7 1209 aaPredicted RBP11.82□□□□□ -0.52
CKS1B-206ENST00000474215 TSSK4Q6SA08 328 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 DDX42Q86XP3 938 aaKnown RBP eCLIP11.82□□□□□ -0.52
CKS1B-206ENST00000474215 ADGRG2Q8IZP9 1017 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 SLC4A11Q8NBS3 891 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 ATRIPQ8WXE1 791 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 NELL1Q92832 810 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 EXOC4Q96A65 974 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 CHFRQ96EP1 664 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 FAM126AQ9BYI3 521 aaPredicted RBP11.82□□□□□ -0.52
CKS1B-206ENST00000474215 CCSER2Q9H7U1 834 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 FBRSL1Q9HCM7 1045 aaKnown RBP11.82□□□□□ -0.52
CKS1B-206ENST00000474215 PNPLA8Q9NP80 782 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 TLR8Q9NR97 1041 aaKnown RBP11.82□□□□□ -0.52
CKS1B-206ENST00000474215 ZSCAN32Q9NX65 697 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 CFAP97Q9P2B7 532 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 SCML2Q9UQR0 700 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 PCDHGA2Q9Y5H1 932 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 OBSL1O75147 1896 aa11.82□□□□□ -0.52
CKS1B-206ENST00000474215 USP34Q70CQ2 3546 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 F5P12259 2224 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 E2F8A0AVK6 867 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 SLC9A3R1O14745 358 aaPredicted RBP11.81□□□□□ -0.52
CKS1B-206ENST00000474215 NFATC1O95644 943 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 LMNAP02545 664 aaKnown RBP11.81□□□□□ -0.52
CKS1B-206ENST00000474215 ACO1P21399 889 aaKnown RBP11.81□□□□□ -0.52
CKS1B-206ENST00000474215 TBXAS1P24557 533 aaPredicted RBP11.81□□□□□ -0.52
CKS1B-206ENST00000474215 PGFP49763 221 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 NRLP54845 237 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 YWHAEP62258 255 aaKnown RBP11.81□□□□□ -0.52
CKS1B-206ENST00000474215 CETN1Q12798 172 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 LRMPQ12912 555 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 FSTL4Q6MZW2 842 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 Q6ZS52 159 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 GPRIN1Q7Z2K8 1008 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 TRIM59Q8IWR1 403 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 ZBTB44Q8NCP5 570 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 JAKMIP2Q96AA8 810 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 P2RY13Q9BPV8 354 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
CKS1B-206ENST00000474215 UBXN6Q9BZV1 441 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 NACA2Q9H009 215 aa11.81□□□□□ -0.52
CKS1B-206ENST00000474215 FRYLO94915 3013 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 P4HA2O15460 535 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 CYP26A1O43174 497 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 TLR5O60602 858 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 ABCB7O75027 752 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 FGFR1OPO95684 399 aaKnown RBP11.8□□□□□ -0.52
CKS1B-206ENST00000474215 TDGF1P13385 188 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 DRD1P21728 446 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 KIF11P52732 1056 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 MARSP56192 900 aaKnown RBP11.8□□□□□ -0.52
CKS1B-206ENST00000474215 SATB1Q01826 763 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 ARHGAP17Q68EM7 881 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 CLEC17AQ6ZS10 378 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 ANKRD52Q8NB46 1076 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 LMO3Q8TAP4 145 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 ZFRQ96KR1 1074 aaKnown RBP11.8□□□□□ -0.52
CKS1B-206ENST00000474215 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 TBC1D14Q9P2M4 693 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 RWDD2AQ9UIY3 292 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 KIAA1257Q9ULG3 409 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms