RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PCDHB6Q9Y5E3 794 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 SHROOM3Q8TF72 1996 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 PTPRDP23468 1912 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 PLXNB3Q9ULL4 1909 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 SCN1AP35498 2009 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 MYH11P35749 1972 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 A0A0B4J269 797 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 A0A1B0GVT2 93 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 WASH3PC4AMC7 463 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 ANKRD63C9JTQ0 380 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 NEDD8-MDP1E9PL57 170 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 KCNK3O14649 394 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 ATXN7O15265 892 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 TULP3O75386 442 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 JUPP14923 745 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 PCSK1P29120 753 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 CD6P30203 668 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 EIF2DP41214 584 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 PNPLA4P41247 253 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 CSNK1EP49674 416 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 NCKAP1LP55160 1127 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 CXADRP78310 365 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 CCDC173Q0VFZ6 552 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 SUZ12Q15022 739 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 HLA-BQ31612 363 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 PREPLQ4J6C6 727 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 DCAF12L1Q5VU92 463 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 GRAMD4Q6IC98 578 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 TPGS1Q6ZTW0 290 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 ADAT2Q7Z6V5 191 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 OSTM1Q86WC4 334 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 MIB1Q86YT6 1006 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 ZNF843Q8N446 348 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 FAM184AQ8NB25 1140 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 SAAL1Q96ER3 474 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 TOE1Q96GM8 510 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 NAF1Q96HR8 494 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 MYRFLQ96LU7 910 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 TSPAN18Q96SJ8 248 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 MMS19Q96T76 1030 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 SYT15Q9BQS2 421 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 REEP2Q9BRK0 252 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 FAM213AQ9BRX8 229 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 ZDHHC5Q9C0B5 715 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 IKZF4Q9H2S9 585 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 ASB7Q9H672 318 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 TBC1D14Q9P2M4 693 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 EIF2B4Q9UI10 523 aaKnown RBP7.34□□□□□ -1.23
HDAC1-204ENST00000471488 BTBD3Q9Y2F9 522 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 C2CD2Q9Y426 696 aa7.34□□□□□ -1.23
HDAC1-204ENST00000471488 URB1O60287 2271 aaKnown RBP7.34□□□□□ -1.24
HDAC1-204ENST00000471488 PCDH15Q96QU1 1955 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 A0A087WV48 116 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 GOLGA8IPA6NC78 632 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 VWA3AA6NCI4 1184 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 GOLGA8JA6NMD2 632 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 F8VP50 259 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 BCAT2O15382 392 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 FLRT2O43155 660 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 TRAK2O60296 914 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 FAM189A1O60320 539 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 CBFA2T3O75081 653 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 GJB3O75712 270 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 TMEM191BP0C7N4 346 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 ACADMP11310 421 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 HNF1BP35680 557 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 CFHR1Q03591 330 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 TAF10Q12962 218 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 ORC2Q13416 577 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 STARD3Q14849 445 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 SF3A1Q15459 793 aaKnown RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 MDH1BQ5I0G3 518 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 C6orf118Q5T5N4 469 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 MCTP1Q6DN14 999 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 SLC39A4Q6P5W5 647 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 IL27RAQ6UWB1 636 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 LAYNQ6UX15 382 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 DDX42Q86XP3 938 aaKnown RBP eCLIP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 TMEM25Q86YD3 366 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 CCDC83Q8IWF9 413 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 TMEM86AQ8N2M4 240 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 IGSF22Q8N9C0 903 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 SYT2Q8N9I0 419 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 TERB1Q8NA31 727 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 ENGASEQ8NFI3 743 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 LEO1Q8WVC0 666 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 NXPE2Q96DL1 559 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 MRGPRX1Q96LB2 322 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 SLITRK1Q96PX8 696 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 BBS2Q9BXC9 721 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 FOXP1Q9H334 677 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 PARVGQ9HBI0 331 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 EHD2Q9NZN4 543 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 KIAA1522Q9P206 1035 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 FTSJ1Q9UET6 329 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 CHORDC1Q9UHD1 332 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-204ENST00000471488 PTPRBP23467 1997 aa7.33□□□□□ -1.24
HDAC1-204ENST00000471488 HELZP42694 1942 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms