RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 TARDBPQ13148 414 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC3-203ENST00000467533 MAPK7Q13164 816 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 PDIA5Q14554 519 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 RTP5Q14D33 572 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 SV2CQ496J9 727 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 BROXQ5VW32 411 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 SPATA2LQ8IUW3 424 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-203ENST00000467533 KIAA1958Q8N8K9 716 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 SNX19Q92543 992 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 MRGPRX1Q96LB2 322 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 TRIM4Q9C037 500 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 NRSN2Q9GZP1 204 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 C17orf75Q9HAS0 396 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 TRPM5Q9NZQ8 1165 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 EIF2B4Q9UI10 523 aaKnown RBP10.97□□□□□ -0.65
HDAC3-203ENST00000467533 PCDHB6Q9Y5E3 794 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 UBR5O95071 2799 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 SFI1A8K8P3 1242 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 OGTO15294 1046 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 RFPL3O75679 317 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 ABL1P00519 1130 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 OR52Z1P0C646 297 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 MAPTP10636 758 aaKnown RBP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 LIG4P49917 911 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 SMTNP53814 917 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 IL9RQ01113 521 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 MYL7Q01449 175 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 KIF19Q2TAC6 998 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 ANO4Q32M45 955 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 PKDCCQ504Y2 493 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 COLEC12Q5KU26 742 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 ARHGAP40Q5TG30 622 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 HES3Q5TGS1 186 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 RUFY3Q7L099 469 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 DDX42Q86XP3 938 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 CD302Q8IX05 232 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 ETFBKMTQ8IXQ9 262 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 TMEM161BQ8NDZ6 487 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 CADM4Q8NFZ8 388 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 WASF1Q92558 559 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 NAF1Q96HR8 494 aaKnown RBP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 ZNF560Q96MR9 790 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 RUSC1Q9BVN2 902 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 CCSER1Q9C0I3 900 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 CPNE5Q9HCH3 593 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 CD248Q9HCU0 757 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 DDX43Q9NXZ2 648 aaKnown RBP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 WSB2Q9NYS7 404 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 TBC1D14Q9P2M4 693 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.65
HDAC3-203ENST00000467533 GTF3C4Q9UKN8 822 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 HCN2Q9UL51 889 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 SNX11Q9Y5W9 270 aa10.96□□□□□ -0.65
HDAC3-203ENST00000467533 TEX15Q9BXT5 2789 aa10.96□□□□□ -0.66
HDAC3-203ENST00000467533 E2F8A0AVK6 867 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 KPNA7A9QM74 516 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 E9PMD0 336 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 ENC1O14682 589 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 HNRNPDLO14979 420 aaKnown RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 TRIM24O15164 1050 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 HOXC11O43248 304 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 MBL2P11226 248 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 KRT10P13645 584 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 CSNK1EP49674 416 aaKnown RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 AFF3P51826 1226 aaKnown RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 FOSBP53539 338 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 UCNP55089 124 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 RAD51AP2Q09MP3 1159 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 TEAD4Q15561 434 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 CCDC142Q17RM4 750 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 GRAMD4Q6IC98 578 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 USP49Q70CQ1 688 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 DIS3L2Q8IYB7 885 aaKnown RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 SNX29Q8TEQ0 813 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 SCFD1Q8WVM8 642 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 SPIRE2Q8WWL2 714 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 GABRG3Q99928 467 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 MSTO1Q9BUK6 570 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 DPP3Q9NY33 737 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 ORC3Q9UBD5 711 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 DERAQ9Y315 318 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 STARD13Q9Y3M8 1113 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 PCDHGA1Q9Y5H4 931 aa10.95□□□□□ -0.66
HDAC3-203ENST00000467533 HEMK1Q9Y5R4 338 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-203ENST00000467533 METTL12A8MUP2 240 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 KCNK3O14649 394 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 FAM189A1O60320 539 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 PCDHGA12O60330 932 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 CDC45O75419 566 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 ADRB2P07550 413 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 PLS3P13797 630 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 STARD3Q14849 445 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 TBC1D25Q3MII6 688 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 CFAP221Q4G0U5 840 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 BMP2KLQ5H9B9 411 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 RINT1Q6NUQ1 792 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms