RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 RGS10O43665 173 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 PIAS2O75928 621 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 TXNP10599 105 aaKnown RBP4.52□□□□□ -1.69
VPS50-209ENST00000467326 RPL17P18621 184 aaKnown RBP4.52□□□□□ -1.69
VPS50-209ENST00000467326 PRKAR1BP31321 381 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 CARSP49589 748 aaKnown RBP4.52□□□□□ -1.69
VPS50-209ENST00000467326 ITGA8P53708 1063 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 E2F1Q01094 437 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 ARHGEF7Q14155 803 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 ZRSR2Q15696 482 aaKnown RBP4.52□□□□□ -1.69
VPS50-209ENST00000467326 KIRREL2Q6UWL6 708 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 KCTD20Q7Z5Y7 419 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 YAF2Q8IY57 180 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 NAP1L5Q96NT1 182 aaPredicted RBP4.52□□□□□ -1.69
VPS50-209ENST00000467326 MACROD1Q9BQ69 325 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 APOL5Q9BWW9 433 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 DHX36Q9H2U1 1008 aaKnown RBP4.52□□□□□ -1.69
VPS50-209ENST00000467326 MID2Q9UJV3 735 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 ITGB1BP2Q9UKP3 347 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 PNMA2Q9UL42 364 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 SMIM22K7EJ46 135 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 PSMD9O00233 223 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 CAND2O75155 1236 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 INMTO95050 263 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 PDE8BO95263 885 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 EPHA3P29320 983 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 CPT1AP50416 773 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 SUMO2P61956 95 aaKnown RBP4.51□□□□□ -1.69
VPS50-209ENST00000467326 UBE4AQ14139 1066 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 SLC29A2Q14542 456 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 MTHFD1LQ6UB35 978 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 TRIM72Q6ZMU5 477 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 UNC13DQ70J99 1090 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 KRT78Q8N1N4 520 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 CYP2W1Q8TAV3 490 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 IPCEF1Q8WWN9 437 aaPredicted RBP4.51□□□□□ -1.69
VPS50-209ENST00000467326 DPF1Q92782 380 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 EVI5LQ96CN4 794 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 RSPRY1Q96DX4 576 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 DAZAP1Q96EP5 407 aaKnown RBP4.51□□□□□ -1.69
VPS50-209ENST00000467326 PRR25Q96S07 402 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 VN1R3Q9BXE9 311 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 TRIM5Q9C035 493 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 NUP62CLQ9H1M0 184 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 PNPLA8Q9NP80 782 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 ZNF212Q9UDV6 495 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 RGS17Q9UGC6 210 aaPredicted RBP4.51□□□□□ -1.69
VPS50-209ENST00000467326 CORO2BQ9UQ03 480 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 DRG1Q9Y295 367 aaKnown RBP4.51□□□□□ -1.69
VPS50-209ENST00000467326 SNX13Q9Y5W8 968 aa4.51□□□□□ -1.69
VPS50-209ENST00000467326 AQP7P3A6NL99 342 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 KRT18P05783 430 aaKnown RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 HGFP14210 728 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 TPH1P17752 444 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 FPR3P25089 353 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 UQCRC1P31930 480 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 GKP32189 559 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 TIAL1Q01085 375 aaKnown RBP eCLIP4.5□□□□□ -1.69
VPS50-209ENST00000467326 TFF2Q03403 129 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 FOXF2Q12947 444 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 BRD3Q15059 726 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 PROSER3Q2NL68 480 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 TBC1D25Q3MII6 688 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 L1TD1Q5T7N2 865 aaKnown RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 PRAMEF17Q5VTA0 474 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 ZKSCAN2Q63HK3 967 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 FCRL6Q6DN72 434 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 ZNF782Q6ZMW2 699 aaPredicted RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 SRRM1Q8IYB3 904 aaKnown RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 SIRT6Q8N6T7 355 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 SEMA6DQ8NFY4 1073 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 ZNF668Q96K58 619 aaPredicted RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 SNX22Q96L94 193 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 LENG8Q96PV6 779 aaPredicted RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 THAP7Q9BT49 309 aaPredicted RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 UNKQ9C0B0 810 aaKnown RBP4.5□□□□□ -1.69
VPS50-209ENST00000467326 CHST8Q9H2A9 424 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 FAM83DQ9H4H8 585 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 DDX21Q9NR30 783 aaKnown RBP eCLIP4.5□□□□□ -1.69
VPS50-209ENST00000467326 USP22Q9UPT9 525 aa4.5□□□□□ -1.69
VPS50-209ENST00000467326 CCDC189A1A4V9 331 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 CGB1A6NKQ9 187 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 F8W8V4 182 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 H7C1Q1 480 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 AP4M1O00189 453 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 FOXN3O00409 490 aaPredicted RBP4.49□□□□□ -1.69
VPS50-209ENST00000467326 EXOC3O60645 756 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 PQBP1O60828 265 aaKnown RBP4.49□□□□□ -1.69
VPS50-209ENST00000467326 MT-ND5P03915 603 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 IL1R2P27930 398 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 PGDP52209 483 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 SRSF4Q08170 494 aaKnown RBP4.49□□□□□ -1.69
VPS50-209ENST00000467326 FOXD4Q12950 439 aaPredicted RBP4.49□□□□□ -1.69
VPS50-209ENST00000467326 STK3Q13188 491 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 HLTFQ14527 1009 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS50-209ENST00000467326 NPY5RQ15761 445 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 ZNF750Q32MQ0 723 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
VPS50-209ENST00000467326 CLEC4GQ6UXB4 293 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 KRBA2Q6ZNG9 492 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms